RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ZNF468Q5VIY5 522 aaPredicted RBP17.83■□□□□ 0.44
CLIP2-206ENST00000487091 C1QL3Q5VWW1 255 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 MED27Q6P2C8 311 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 GALNTL5Q7Z4T8 443 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 FJX1Q86VR8 437 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 MMGT1Q8N4V1 131 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 FAM98AQ8NCA5 519 aaKnown RBP17.83■□□□□ 0.44
CLIP2-206ENST00000487091 THAP3Q8WTV1 239 aaPredicted RBP17.83■□□□□ 0.44
CLIP2-206ENST00000487091 KCTD4Q8WVF5 259 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 VMP1Q96GC9 406 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 TBCDQ9BTW9 1192 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 MS4A8Q9BY19 250 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 HES7Q9BYE0 225 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 TSPYL1Q9H0U9 437 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 ADAP2Q9NPF8 381 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 SNX15Q9NRS6 342 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 PNO1Q9NRX1 252 aaKnown RBP17.83■□□□□ 0.44
CLIP2-206ENST00000487091 KCMF1Q9P0J7 381 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 MTRF1LQ9UGC7 380 aaKnown RBP17.83■□□□□ 0.44
CLIP2-206ENST00000487091 ADGRE2Q9UHX3 823 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 NOTCH2Q04721 2471 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 CACNA1DQ01668 2161 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 CROCCQ5TZA2 2017 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 TGFBR3LH3BV60 316 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 SLC25A12O75746 678 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 EPB42P16452 691 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 CERS1P27544 350 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 HLCSP50747 726 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 ALDH6A1Q02252 535 aaKnown RBP17.82■□□□□ 0.44
CLIP2-206ENST00000487091 BMPR2Q13873 1038 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 NAA30Q147X3 362 aaPredicted RBP17.82■□□□□ 0.44
CLIP2-206ENST00000487091 CHSY3Q70JA7 882 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 UBE3DQ7Z6J8 389 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 FAM47BQ8NA70 645 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 OR7G3Q8NG95 312 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 FRMD6Q96NE9 622 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 FUT8Q9BYC5 575 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 ACSS3Q9H6R3 686 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 NINJ2Q9NZG7 142 aa17.82■□□□□ 0.44
CLIP2-206ENST00000487091 NBPF19A0A087WUL8 3843 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 A0A096LPK6 155 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 TRBV11-1A0A0K0K1C0 115 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 ZG16O60844 167 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 SCELO95171 688 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 KLHL2O95198 593 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 ATP5A1P25705 553 aaKnown RBP17.81■□□□□ 0.44
CLIP2-206ENST00000487091 COL8A1P27658 744 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 IRF9Q00978 393 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 SRSF11Q05519 484 aaKnown RBP17.81■□□□□ 0.44
CLIP2-206ENST00000487091 SETDB1Q15047 1291 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 ELAVL1Q15717 326 aaKnown RBP17.81■□□□□ 0.44
CLIP2-206ENST00000487091 MAPKAPK3Q16644 382 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 GRHL2Q6ISB3 625 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 ZNF227Q86WZ6 799 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 TMEM132CQ8N3T6 1108 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 ACOT4Q8N9L9 421 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 C7orf57Q8NEG2 295 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 MRRFQ96E11 262 aaKnown RBP17.81■□□□□ 0.44
CLIP2-206ENST00000487091 CMTM7Q96FZ5 175 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 GPR137Q96N19 417 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 CSF3RQ99062 836 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 TSC22D4Q9Y3Q8 395 aa17.81■□□□□ 0.44
CLIP2-206ENST00000487091 TRGV8A0A0C4DH27 118 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 KLK8O60259 260 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 NME2P1O60361 137 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 WISP2O76076 250 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 TGFB1P01137 390 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 PCNAP12004 261 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 NME2P22392 152 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 HIST1H1TP22492 207 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-206ENST00000487091 TYK2P29597 1187 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 PPP2R1BP30154 601 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 CA7P43166 264 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 SERPINB8P50452 374 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 ALDH18A1P54886 795 aaKnown RBP17.8■□□□□ 0.44
CLIP2-206ENST00000487091 UAP1Q16222 522 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-206ENST00000487091 AP5B1Q2VPB7 878 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 DEPDC1Q5TB30 811 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 LIPJQ5W064 366 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 METTL2BQ6P1Q9 378 aaKnown RBP17.8■□□□□ 0.44
CLIP2-206ENST00000487091 KLC3Q6P597 504 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 ZNF793Q6ZN11 406 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-206ENST00000487091 TEX9Q8N6V9 391 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 MNS1Q8NEH6 495 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 NCLNQ969V3 563 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 TMEM125Q96AQ2 219 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 GPR78Q96P69 363 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 CCDC77Q9BR77 488 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 VTI1BQ9UEU0 232 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 DMGDHQ9UI17 866 aaKnown RBP17.8■□□□□ 0.44
CLIP2-206ENST00000487091 ZNF223Q9UK11 482 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-206ENST00000487091 FBXW2Q9UKT8 454 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 ANGPTL3Q9Y5C1 460 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 SPACA6W5XKT8 324 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 GTF3C1Q12789 2109 aa17.8■□□□□ 0.44
CLIP2-206ENST00000487091 UGDHO60701 494 aa17.79■□□□□ 0.44
CLIP2-206ENST00000487091 ZFAND5O76080 213 aa17.79■□□□□ 0.44
CLIP2-206ENST00000487091 ALDOAP04075 364 aaKnown RBP17.79■□□□□ 0.44
CLIP2-206ENST00000487091 GFAPP14136 432 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms