RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ACOT4Q8N9L9 421 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 FAM47BQ8NA70 645 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 OR10A6Q8NH74 314 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 ZFP28Q8NHY6 868 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 BAHD1Q8TBE0 780 aaPredicted RBP6.7□□□□□ -1.34
SF3A3-206ENST00000487062 RSC1A1Q92681 617 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 TM4SF19Q96DZ7 209 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF583Q96ND8 569 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 OR2A5Q96R48 311 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 TACO1Q9BSH4 297 aaKnown RBP6.7□□□□□ -1.34
SF3A3-206ENST00000487062 TRIM8Q9BZR9 551 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 SEMA6CQ9H3T2 930 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 EPB41L1Q9H4G0 881 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 PIF1Q9H611 641 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 KAT8Q9H7Z6 458 aaKnown RBP6.7□□□□□ -1.34
SF3A3-206ENST00000487062 TPT1P8Q9HAU6 139 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 LHX9Q9NQ69 397 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 PRDM7Q9NQW5 492 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 GIMAP4Q9NUV9 329 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 TAS2R9Q9NYW1 312 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 EHD3Q9NZN3 535 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 GMPR2Q9P2T1 348 aaKnown RBP6.7□□□□□ -1.34
SF3A3-206ENST00000487062 PHF11Q9UIL8 331 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 PSME2Q9UL46 239 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 EXO1Q9UQ84 846 aaKnown RBP6.7□□□□□ -1.34
SF3A3-206ENST00000487062 BTBD3Q9Y2F9 522 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 GMEB1Q9Y692 573 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 SPAG17Q6Q759 2223 aa6.7□□□□□ -1.34
SF3A3-206ENST00000487062 A0A0G2JN53 185 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 TMEM221A6NGB7 291 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 M0R296 226 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CXCR6O00574 342 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CASQ2O14958 399 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 PPM1DO15297 605 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 YKT6O15498 198 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 TMPRSS11DO60235 418 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CTSVO60911 334 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 SDC3O75056 442 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 KLHL18O94889 574 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 KRT75O95678 551 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 C6orf47O95873 294 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 STATHP02808 62 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ABCB1P08183 1280 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF888P0CJ79 500 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ALPPL2P10696 532 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 FCGR1AP12314 374 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 NCK1P16333 377 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 TYRP1P17643 537 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 EFNA1P20827 205 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 UQCRC2P22695 453 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 NTSP30990 170 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CNR2P34972 360 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CHI3L1P36222 383 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 BUD31P41223 144 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CAPZBP47756 277 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 RXRGP48443 463 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 MANFP55145 182 aaKnown RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 RAB8AP61006 207 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 SKP1P63208 163 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 BTN3A2P78410 334 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 FOXK2Q01167 660 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 FADDQ13158 208 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 TRIP10Q15642 601 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 LINC01559Q495D7 138 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 PLK5Q496M5 336 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 FAM98BQ52LJ0 330 aaKnown RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 TBCELQ5QJ74 424 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 COX20Q5RI15 118 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 NDUFAF5Q5TEU4 345 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CPZQ66K79 652 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 MRM1Q6IN84 353 aaKnown RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 IRGCQ6NXR0 463 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ANGPTL8Q6UXH0 198 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF793Q6ZN11 406 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CEP68Q76N32 757 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 VN1R4Q7Z5H5 301 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 RABEPKQ7Z6M1 372 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 C17orf82Q86X59 251 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF761Q86XN6 746 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 SFTPA2Q8IWL1 248 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 C19orf47Q8N9M1 422 aaKnown RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 OR52E4Q8NGH9 312 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 OR8K5Q8NH50 307 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 UTP15Q8TED0 518 aaKnown RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ZFP90Q8TF47 636 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CANT1Q8WVQ1 401 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 OR5P2Q8WZ92 322 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 FIG4Q92562 907 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 NCLNQ969V3 563 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 FAM162AQ96A26 154 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ZBED6CLQ96FA7 236 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 AURKBQ96GD4 344 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 AHCYL2Q96HN2 611 aaKnown RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 REXO5Q96IC2 774 aaKnown RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 TEFMQ96QE5 360 aaKnown RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 BBS4Q96RK4 519 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 SERINC2Q96SA4 455 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CD180Q99467 661 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ELF4Q99607 663 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms