RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 GPR32O75388 356 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 HTR1AP08908 422 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 CKMT1AP12532 417 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 EPCAMP16422 314 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 MAGEA2P43356 314 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 ARSDP51689 593 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 LIPKQ5VXJ0 399 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 ENPP6Q6UWR7 440 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 DRAXINQ8NBI3 349 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-210ENST00000487017 SHKBP1Q8TBC3 707 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 GAS2L1Q99501 681 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-210ENST00000487017 C17orf62Q9BQA9 187 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 IGKV6-21A0A0C4DH24 114 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 INMT-MINDY4F8WBC2 141 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 SLC1A7O00341 560 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 GABBR2O75899 941 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 MLLT1Q03111 559 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-210ENST00000487017 RASGEF1AQ8N9B8 481 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 IGSF5Q9NSI5 407 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 CDC14AQ9UNH5 594 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 LRRN3E7EW58 273 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 ZNF821O75541 412 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-210ENST00000487017 CCND3P30281 292 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-210ENST00000487017 MLLT3P42568 568 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-210ENST00000487017 TEAD2Q15562 447 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 SLC27A4Q6P1M0 643 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 XKRXQ6PP77 449 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 NCCRP1Q6ZVX7 275 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-210ENST00000487017 AMIGO3Q86WK7 504 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 SPAG16Q8N0X2 631 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 THEM6Q8WUY1 208 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 SGCDQ92629 289 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 ITFG2Q969R8 447 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 FUNDC2Q9BWH2 189 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 LRRN3Q9H3W5 708 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 SMAD9O15198 467 aaKnown RBP15.82■□□□□ 0.12
COL7A1-210ENST00000487017 FLRT2O43155 660 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 GRK5P34947 590 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 MLLT10P55197 1068 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 PON2Q15165 354 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 PUS10Q3MIT2 529 aaKnown RBP15.82■□□□□ 0.12
COL7A1-210ENST00000487017 TP53INP2Q8IXH6 220 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 FBXO27Q8NI29 283 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 SERINC1Q9NRX5 453 aa15.82■□□□□ 0.12
COL7A1-210ENST00000487017 GRID2O43424 1007 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 TNFP01375 233 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 SOD2P04179 222 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 IL3P08700 152 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 FSHRP23945 695 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 CLDN8P56748 225 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 ZNF280BQ86YH2 543 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 TRAM1L1Q8N609 369 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 OR51G2Q8NGK0 314 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 OR10T2Q8NGX3 314 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 OR2L8Q8NGY9 312 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 TAS2R10Q9NYW0 307 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 EXTL2Q9UBQ6 330 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 ABCG2Q9UNQ0 655 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 A8MV72 311 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-210ENST00000487017 H3BSH0 61 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 TSPAN6O43657 245 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 ZNF806P0C7X5 589 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 GSTT2P0CG29 244 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 BTBD16Q32M84 506 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 SLC35F1Q5T1Q4 408 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 ISCA2Q86U28 154 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 JAGN1Q8N5M9 183 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 OR52B6Q8NGF0 335 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 THAP6Q8TBB0 222 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 RFT1Q96AA3 541 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 IFT52Q9Y366 437 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 MYH10P35580 1976 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 IGKV6D-21A0A0A0MT36 114 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 NME4O00746 187 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 OR12D1P0DN82 309 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 EDNRBP24530 442 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 HSD11B1P28845 292 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 LCN1P31025 176 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 MAPK15Q8TD08 544 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 AKAP1Q92667 903 aaKnown RBP eCLIP15.81■□□□□ 0.12
COL7A1-210ENST00000487017 DPYSL5Q9BPU6 564 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 NUDT15Q9NV35 164 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 ALG5Q9Y673 324 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 A0A1B0GVT2 93 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 GLOD5A6NK44 160 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 ZNF726A6NNF4 738 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 FOXD2O60548 495 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-210ENST00000487017 HOXD8P13378 290 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-210ENST00000487017 CRISP1P54107 249 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 DECR1Q16698 335 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 NAXEQ8NCW5 288 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 NEIL3Q8TAT5 605 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 SYT11Q9BT88 431 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 C14orf119Q9NWQ9 140 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 ZNF451Q9Y4E5 1061 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 KAT7O95251 611 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 ETV3P41162 512 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 SLC6A9P48067 706 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 TLE2Q04725 743 aa15.81■□□□□ 0.12
COL7A1-210ENST00000487017 NXPE2Q96DL1 559 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms