RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 VPS50Q96JG6 964 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 PPP3R2Q96LZ3 170 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 IP6K3Q96PC2 410 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 CRB3Q9BUF7 120 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 SORBS1Q9BX66 1292 aaKnown RBP13.84□□□□□ -0.19
APH1A-208ENST00000486720 TUBB1Q9H4B7 451 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 SOX17Q9H6I2 414 aaPredicted RBP13.84□□□□□ -0.19
APH1A-208ENST00000486720 LRTM1Q9HBL6 345 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 SEMA3GQ9NS98 782 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 C1orf109Q9NX04 203 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 VTI1BQ9UEU0 232 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 MCM8Q9UJA3 840 aa13.84□□□□□ -0.19
APH1A-208ENST00000486720 SYNDIG1LA6NDD5 238 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 CLDN4O14493 209 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 SEC22BO75396 215 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 EEDO75530 441 aaKnown RBP13.83□□□□□ -0.2
APH1A-208ENST00000486720 KLK1P06870 262 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 HEXBP07686 556 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 FAM58BPP0C7Q3 252 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 CPN2P22792 545 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 TPP2P29144 1249 aaPredicted RBP13.83□□□□□ -0.2
APH1A-208ENST00000486720 TLX1P31314 330 aaPredicted RBP13.83□□□□□ -0.2
APH1A-208ENST00000486720 BUD31P41223 144 aaPredicted RBP13.83□□□□□ -0.2
APH1A-208ENST00000486720 MAPK12P53778 367 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 EMP2P54851 167 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 RPS18P62269 152 aaKnown RBP13.83□□□□□ -0.2
APH1A-208ENST00000486720 BTKQ06187 659 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 KLC1Q07866 573 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 PDCD2Q16342 344 aaPredicted RBP13.83□□□□□ -0.2
APH1A-208ENST00000486720 MINDY4Q4G0A6 757 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 XKR7Q5GH72 579 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 MFSD4BQ5TF39 518 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 MRM1Q6IN84 353 aaKnown RBP13.83□□□□□ -0.2
APH1A-208ENST00000486720 GALNT18Q6P9A2 607 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 ZNF595Q8IYB9 648 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 EFCAB3Q8N7B9 438 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 PIWIL2Q8TC59 973 aaKnown RBP13.83□□□□□ -0.2
APH1A-208ENST00000486720 C19orf60Q96EN9 201 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 APIPQ96GX9 242 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 MAPKAP1Q9BPZ7 522 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 WDR41Q9HAD4 459 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 PNPOQ9NVS9 261 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 C3orf18Q9UK00 162 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 FBXW2Q9UKT8 454 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 MKL2Q9ULH7 1088 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 ZMIZ1Q9ULJ6 1067 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 TMED5Q9Y3A6 229 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 CCL27Q9Y4X3 112 aa13.83□□□□□ -0.2
APH1A-208ENST00000486720 MRPS18BQ9Y676 258 aaKnown RBP13.83□□□□□ -0.2
APH1A-208ENST00000486720 GNG14A0A1W2PPG7 69 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 TRPC5OSA6NMA1 111 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 IDSB3KWA1 339 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 LSM1O15116 133 aaKnown RBP13.82□□□□□ -0.2
APH1A-208ENST00000486720 HDAC3O15379 428 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 EFSO43281 561 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 TMPRSS11DO60235 418 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 PCDH7O60245 1069 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 DNAJB6O75190 326 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 VPS4BO75351 444 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 TIA1P31483 386 aaKnown RBP eCLIP13.82□□□□□ -0.2
APH1A-208ENST00000486720 HSD17B7P56937 341 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 TNFRSF17Q02223 184 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 UGT8Q16880 541 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 ATP6AP1LQ52LC2 224 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 QSOX2Q6ZRP7 698 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 SHISA6Q6ZSJ9 500 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 Q6ZSR9 355 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 PRSS58Q8IYP2 241 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 OR2T11Q8NH01 316 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 METTL21AQ8WXB1 218 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 TUBGCP3Q96CW5 907 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 CNTNAP3BQ96NU0 1288 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 RBCK1Q9BYM8 510 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 CNTNAP3Q9BZ76 1288 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 LANCL2Q9NS86 450 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 KCMF1Q9P0J7 381 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 C19orf25Q9UFG5 118 aaPredicted RBP13.82□□□□□ -0.2
APH1A-208ENST00000486720 MMACHCQ9Y4U1 282 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 ASB4Q9Y574 426 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 PTGDR2Q9Y5Y4 395 aa13.82□□□□□ -0.2
APH1A-208ENST00000486720 CYR61O00622 381 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 PROM1O43490 865 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 PRMT3O60678 531 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 B4GALT2O60909 372 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 JRKO75564 520 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 GBAP04062 536 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 UMODP07911 640 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 ANXA4P09525 319 aaPredicted RBP13.81□□□□□ -0.2
APH1A-208ENST00000486720 KITP10721 976 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 MMP11P24347 488 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 MAPK1P28482 360 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 PPP2R1BP30154 601 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 SRSF6Q13247 344 aaKnown RBP13.81□□□□□ -0.2
APH1A-208ENST00000486720 MAD2L1Q13257 205 aaPredicted RBP13.81□□□□□ -0.2
APH1A-208ENST00000486720 ERV3-1Q14264 604 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 SMU1Q2TAY7 513 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 GALNTL6Q49A17 601 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 LAPTM4BQ86VI4 370 aa13.81□□□□□ -0.2
APH1A-208ENST00000486720 WDR75Q8IWA0 830 aaKnown RBP13.81□□□□□ -0.2
APH1A-208ENST00000486720 PARP9Q8IXQ6 854 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms