RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 NR4A3Q92570 626 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 GMPPAQ96IJ6 420 aaPredicted RBP5.27□□□□□ -1.57
RTN4-214ENST00000486085 MAGED4Q96JG8 741 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 C10orf90Q96M02 699 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 CCDC114Q96M63 670 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 NECTIN4Q96NY8 510 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 NDNQ99608 321 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 PIGQQ9BRB3 760 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 UPF3BQ9BZI7 483 aaKnown RBP5.27□□□□□ -1.57
RTN4-214ENST00000486085 RIMS4Q9H426 269 aaPredicted RBP5.27□□□□□ -1.57
RTN4-214ENST00000486085 PKD2L2Q9NZM6 624 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 MAN1B1Q9UKM7 699 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 PYGO1Q9Y3Y4 419 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 ARID2Q68CP9 1835 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 TRBV5-5A0A0J9YX44 114 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 ESYT2A0FGR8 921 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 CCDC69A6NI79 296 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 F5H6K3 240 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 SIX3O95343 332 aaPredicted RBP5.26□□□□□ -1.57
RTN4-214ENST00000486085 NDUFB10O96000 172 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 CETN2P41208 172 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 DNA2P51530 1060 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 CACNG1Q06432 222 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 KLRC3Q07444 240 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 OPCMLQ14982 345 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 GALNT17Q6IS24 598 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 CYB5D1Q6P9G0 228 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 Q6ZSR9 355 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 BTN2A1Q7KYR7 527 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 PTAR1Q7Z6K3 402 aaPredicted RBP5.26□□□□□ -1.57
RTN4-214ENST00000486085 ANKRD23Q86SG2 305 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 RAB42Q8N4Z0 105 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 SLC37A3Q8NCC5 494 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 ZNF248Q8NDW4 579 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 CHURC1Q8WUH1 139 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 CENPTQ96BT3 561 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 FUCA2Q9BTY2 467 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 RBM4Q9BWF3 364 aaKnown RBP5.26□□□□□ -1.57
RTN4-214ENST00000486085 BARHL1Q9BZE3 327 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 SDCBP2Q9H190 292 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 WDR13Q9H1Z4 485 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 MINDY3Q9H8M7 445 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 ATAD3AQ9NVI7 634 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 MAD2L2Q9UI95 211 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 AGTPBP1Q9UPW5 1226 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 WDR37Q9Y2I8 494 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 KIF3AQ9Y496 699 aa5.26□□□□□ -1.57
RTN4-214ENST00000486085 KLF18A0A0U1RQI7 1052 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 C5orf52A6NGY3 159 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 C17orf105B2RV13 164 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 SLCO1B7G3V0H7 640 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 NR5A2O00482 541 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 ZNF195O14628 629 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 NMT2O60551 498 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 FCGR3BO75015 233 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 KHDRBS3O75525 346 aaKnown RBP5.25□□□□□ -1.57
RTN4-214ENST00000486085 DEXIO95424 95 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 SLC2A2P11168 524 aaPredicted RBP5.25□□□□□ -1.57
RTN4-214ENST00000486085 ZNF26P17031 533 aaPredicted RBP5.25□□□□□ -1.57
RTN4-214ENST00000486085 CEBPBP17676 345 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 MT3P25713 68 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 SFTPDP35247 375 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 COPB2P35606 906 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 ANP32AP39687 249 aaKnown RBP5.25□□□□□ -1.57
RTN4-214ENST00000486085 ATP12AP54707 1039 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 SULT2A1Q06520 285 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 PTK6Q13882 451 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 TMEM187Q14656 261 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 TXNRD3NBQ6F5E7 133 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 FAM166AQ6J272 317 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 SLC25A47Q6Q0C1 308 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 ANKRD33Q7Z3H0 272 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 HOGA1Q86XE5 327 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 HSCBQ8IWL3 235 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 KLHL7Q8IXQ5 586 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 OR5AP2Q8NGF4 316 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 APOBEC4Q8WW27 367 aaKnown RBP5.25□□□□□ -1.57
RTN4-214ENST00000486085 PIK3R3Q92569 461 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 CORO2AQ92828 525 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 P2RX5Q93086 422 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 MR1Q95460 341 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 ERO1AQ96HE7 468 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 GDAP1L1Q96MZ0 367 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 KLHL5Q96PQ7 755 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 GLT8D2Q9H1C3 349 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 LMAN1LQ9HAT1 526 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 FGF22Q9HCT0 170 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 RAB9BQ9NP90 201 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 PHPT1Q9NRX4 125 aaPredicted RBP5.25□□□□□ -1.57
RTN4-214ENST00000486085 RNF186Q9NXI6 227 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 HOXC10Q9NYD6 342 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 DNAJB9Q9UBS3 223 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 CLIP2Q9UDT6 1046 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 STX8Q9UNK0 236 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 ZHX2Q9Y6X8 837 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 ZNF236Q9UL36 1845 aa5.25□□□□□ -1.57
RTN4-214ENST00000486085 A0A087X002 238 aa5.24□□□□□ -1.57
RTN4-214ENST00000486085 F8VVB4 439 aa5.24□□□□□ -1.57
RTN4-214ENST00000486085 F8VWA3 439 aa5.24□□□□□ -1.57
RTN4-214ENST00000486085 ZBTB5O15062 677 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms