RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 OR4C11Q6IEV9 310 aa14.94□□□□□ -0.02
UPF3A-208ENST00000484246 MRM1Q6IN84 353 aaKnown RBP14.94□□□□□ -0.02
UPF3A-208ENST00000484246 CPEB2Q7Z5Q1 589 aaKnown RBP14.94□□□□□ -0.02
UPF3A-208ENST00000484246 RNF175Q8N4F7 328 aa14.94□□□□□ -0.02
UPF3A-208ENST00000484246 ARMC2Q8NEN0 867 aa14.94□□□□□ -0.02
UPF3A-208ENST00000484246 WDR77Q9BQA1 342 aaPredicted RBP14.94□□□□□ -0.02
UPF3A-208ENST00000484246 C12orf65Q9H3J6 166 aaKnown RBP14.94□□□□□ -0.02
UPF3A-208ENST00000484246 RRAGDQ9NQL2 400 aaPredicted RBP14.94□□□□□ -0.02
UPF3A-208ENST00000484246 C5AR2Q9P296 337 aa14.94□□□□□ -0.02
UPF3A-208ENST00000484246 ADAM29Q9UKF5 820 aa14.94□□□□□ -0.02
UPF3A-208ENST00000484246 MRPS33Q9Y291 106 aaKnown RBP14.94□□□□□ -0.02
UPF3A-208ENST00000484246 TP53TG5Q9Y2B4 290 aa14.94□□□□□ -0.02
UPF3A-208ENST00000484246 CLDN16Q9Y5I7 305 aa14.94□□□□□ -0.02
UPF3A-208ENST00000484246 ATMQ13315 3056 aa14.94□□□□□ -0.02
UPF3A-208ENST00000484246 A0A0A6YYD5 115 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 SERTM1A2A2V5 107 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 RTCAO00442 366 aaKnown RBP14.93□□□□□ -0.02
UPF3A-208ENST00000484246 PRMT3O60678 531 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 TRIM13O60858 407 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 CDC123O75794 336 aaPredicted RBP14.93□□□□□ -0.02
UPF3A-208ENST00000484246 SERPINA7P05543 415 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 CREB1P16220 341 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 BSGP35613 385 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 NEK2P51955 445 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 EEF1A2Q05639 463 aaKnown RBP14.93□□□□□ -0.02
UPF3A-208ENST00000484246 Q0VFX4 171 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 CSTF3Q12996 717 aaKnown RBP14.93□□□□□ -0.02
UPF3A-208ENST00000484246 NSDHLQ15738 373 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 MFSD4BQ5TF39 518 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 PLAG1Q6DJT9 500 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 TTC19Q6DKK2 380 aaPredicted RBP14.93□□□□□ -0.02
UPF3A-208ENST00000484246 JMJD6Q6NYC1 403 aaPredicted RBP14.93□□□□□ -0.02
UPF3A-208ENST00000484246 LANCL3Q6ZV70 420 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 NUDT13Q86X67 352 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 C10orf107Q8IVU9 208 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 HOMEZQ8IX15 550 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 ZNF843Q8N446 348 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 CDYL2Q8N8U2 506 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 CCDC63Q8NA47 563 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 C7orf57Q8NEG2 295 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 TCP10LQ8TDR4 215 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 SELENOMQ8WWX9 145 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 TSLPQ969D9 159 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 FAM111AQ96PZ2 611 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 NUDT9Q9BW91 350 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 LHPPQ9H008 270 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 ZNF552Q9H707 407 aaPredicted RBP14.93□□□□□ -0.02
UPF3A-208ENST00000484246 ZNF160Q9HCG1 818 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 MS4A12Q9NXJ0 267 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 SLC17A7Q9P2U7 560 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 PHF11Q9UIL8 331 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 ZNF451Q9Y4E5 1061 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 SPACA6W5XKT8 324 aa14.93□□□□□ -0.02
UPF3A-208ENST00000484246 EIF4E1BA6NMX2 242 aaKnown RBP14.92□□□□□ -0.02
UPF3A-208ENST00000484246 FAM227AF5H4B4 570 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 MANBAO00462 879 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 CLDN4O14493 209 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 UBFD1O14562 309 aaKnown RBP14.92□□□□□ -0.02
UPF3A-208ENST00000484246 B4GALT2O60909 372 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 PDGFAP04085 211 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 ALPPP05187 535 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 ICAM2P13598 275 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 GALNT1Q10472 559 aaPredicted RBP14.92□□□□□ -0.02
UPF3A-208ENST00000484246 TERF2Q15554 542 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 CFAP157Q5JU67 520 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 FAAH2Q6GMR7 532 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 IGFL2Q6UWQ7 119 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 IGFL3Q6UXB1 125 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 RNF165Q6ZSG1 346 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 EXOC3L1Q86VI1 746 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 KBTBD2Q8IY47 623 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 METTL4Q8N3J2 472 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 CCNYL1Q8N7R7 359 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 GBP7Q8N8V2 638 aaPredicted RBP14.92□□□□□ -0.02
UPF3A-208ENST00000484246 CSF3RQ99062 836 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 GATA5Q9BWX5 397 aaPredicted RBP14.92□□□□□ -0.02
UPF3A-208ENST00000484246 PRTFDC1Q9NRG1 225 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 LYARQ9NX58 379 aaKnown RBP14.92□□□□□ -0.02
UPF3A-208ENST00000484246 AHSPQ9NZD4 102 aa14.92□□□□□ -0.02
UPF3A-208ENST00000484246 SETXQ7Z333 2677 aaKnown RBP14.91□□□□□ -0.02
UPF3A-208ENST00000484246 OR2W5A6NFC9 320 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 K7EM74 188 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 SAP18O00422 153 aaKnown RBP14.91□□□□□ -0.02
UPF3A-208ENST00000484246 TM9SF1O15321 606 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 NPHS1O60500 1241 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 SPAG7O75391 227 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 PDYNP01213 254 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 PRR35P0CG20 571 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 ITGA3P26006 1051 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 HMOX2P30519 316 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 ALDH3A1P30838 453 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 SERPINB5P36952 375 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 HNRNPFP52597 415 aaKnown RBP14.91□□□□□ -0.02
UPF3A-208ENST00000484246 BTG2P78543 158 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 TNFRSF17Q02223 184 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 TBL3Q12788 808 aaKnown RBP14.91□□□□□ -0.02
UPF3A-208ENST00000484246 EXT1Q16394 746 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 SFT2D3Q587I9 215 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 IRAK1BP1Q5VVH5 260 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 PAPD4Q6PIY7 484 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms