RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 GYS2P54840 703 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 HNRNPH2P55795 449 aaKnown RBP16.83■□□□□ 0.28
CPNE1-224ENST00000483359 RPL38P63173 70 aaKnown RBP16.83■□□□□ 0.28
CPNE1-224ENST00000483359 SPIN4Q56A73 249 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 XKR7Q5GH72 579 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 CCNYL2Q5T2Q4 361 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 PAGE2Q7Z2X7 111 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 PIWIL2Q8TC59 973 aaKnown RBP16.83■□□□□ 0.28
CPNE1-224ENST00000483359 CHTF18Q8WVB6 975 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 C7orf26Q96N11 449 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 SLC26A1Q9H2B4 701 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 DDX31Q9H8H2 851 aaKnown RBP16.83■□□□□ 0.28
CPNE1-224ENST00000483359 LRTM1Q9HBL6 345 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 IGLV3-12A0A075B6K2 115 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 LSM1O15116 133 aaKnown RBP16.82■□□□□ 0.28
CPNE1-224ENST00000483359 PCDH7O60245 1069 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 PEX11AO75192 247 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 FHP07954 510 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 RNH1P13489 461 aaKnown RBP16.82■□□□□ 0.28
CPNE1-224ENST00000483359 FOLR3P41439 243 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 VWA5B1Q5TIE3 1220 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 LRRC69Q6ZNQ3 347 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 ZCCHC7Q8N3Z6 543 aaKnown RBP16.82■□□□□ 0.28
CPNE1-224ENST00000483359 TBC1D20Q96BZ9 403 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 TUBGCP3Q96CW5 907 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 CCNL2Q96S94 520 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-224ENST00000483359 NPLQ9BXD5 320 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-224ENST00000483359 GPR87Q9BY21 358 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 MKL2Q9ULH7 1088 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 GNG14A0A1W2PPG7 69 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 TMEM8BA6NDV4 472 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 FAM58BPP0C7Q3 252 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 HNRNPFP52597 415 aaKnown RBP16.82■□□□□ 0.28
CPNE1-224ENST00000483359 EFNA3P52797 238 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 ARFIP1P53367 373 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 MAPK12P53778 367 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 RAB38P57729 211 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 RAE1P78406 368 aaKnown RBP16.82■□□□□ 0.28
CPNE1-224ENST00000483359 IL10RAQ13651 578 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 ATP1A1-AS1Q5TC04 95 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 FAAH2Q6GMR7 532 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 RNF165Q6ZSG1 346 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 WDR75Q8IWA0 830 aaKnown RBP16.82■□□□□ 0.28
CPNE1-224ENST00000483359 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 OR2Y1Q8NGV0 311 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 CDC26Q8NHZ8 85 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 CNTNAP3BQ96NU0 1288 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 CRB3Q9BUF7 120 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 CNTNAP3Q9BZ76 1288 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 WDR54Q9H977 334 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 C14orf105Q9NVL8 296 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 C1orf109Q9NX04 203 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 TEX10Q9NXF1 929 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-224ENST00000483359 ATG4BQ9Y4P1 393 aa16.82■□□□□ 0.28
CPNE1-224ENST00000483359 URB1O60287 2271 aaKnown RBP16.81■□□□□ 0.28
CPNE1-224ENST00000483359 VSTM2BA6NLU5 285 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 PRKAR1AP10644 381 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 CPN2P22792 545 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 TIA1P31483 386 aaKnown RBP eCLIP16.81■□□□□ 0.283e-7■■■■■ 41.5
CPNE1-224ENST00000483359 MDH1P40925 334 aaKnown RBP16.81■□□□□ 0.28
CPNE1-224ENST00000483359 TLE3Q04726 772 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 RFTN2Q52LD8 501 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-224ENST00000483359 C18orf63Q68DL7 685 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 GPR180Q86V85 440 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 TMEM52Q8NDY8 209 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 THOC1Q96FV9 657 aaKnown RBP16.81■□□□□ 0.28
CPNE1-224ENST00000483359 MESP1Q9BRJ9 268 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 KCMF1Q9P0J7 381 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 C3orf18Q9UK00 162 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 NXT1Q9UKK6 140 aaKnown RBP16.81■□□□□ 0.28
CPNE1-224ENST00000483359 PCDHGA6Q9Y5G7 932 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 NUP210LQ5VU65 1888 aa16.81■□□□□ 0.28
CPNE1-224ENST00000483359 GOLGA8QA0A0J9YX86 632 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 GOLGA8OA6NCC3 632 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 IDSB3KWA1 339 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 GOLGA8NF8WBI6 632 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 HDAC3O15379 428 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 UMODP07911 640 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 OTX2P32243 289 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 HK2P52789 917 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 ATP6AP1LQ52LC2 224 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 RGS9BPQ6ZS82 235 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 MAVSQ7Z434 540 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 OR1F2PQ96R84 312 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 C1orf50Q9BV19 199 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 TGIF2Q9GZN2 237 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 VN1R1Q9GZP7 353 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 LYRM4Q9HD34 91 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 RIC8BQ9NVN3 520 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 ADAM29Q9UKF5 820 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 SPACA6W5XKT8 324 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 LOC400499M0QZD8 3231 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 ANKRD11Q6UB99 2663 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-224ENST00000483359 ACACBO00763 2458 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 GLOD5A6NK44 160 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 EFSO43281 561 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 CREG1O75629 220 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 HEXBP07686 556 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 ANXA4P09525 319 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-224ENST00000483359 JAK1P23458 1154 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms