RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MGAT4BQ9UQ53 548 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TET1Q8NFU7 2136 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 NRCAMQ92823 1304 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 PRSS51A0A1B0GVH4 220 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 OR6C74A6NCV1 312 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 PRR23AA6NEV1 266 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 B4DGG1 531 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 TMPRSS11DO60235 418 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 NOBOXO60393 691 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 NEURL1O76050 574 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 CHRNA1P02708 482 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 UGT2B4P06133 528 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 S100A9P06702 114 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 PROS1P07225 676 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 CD63P08962 238 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 TROVE2P10155 538 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMC6-208ENST00000481708 PIGAP37287 484 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 TNFRSF4P43489 277 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 CSNK1EP49674 416 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 PEX5P50542 639 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 PLTPP55058 493 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 MAT1AQ00266 395 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 ITIH3Q06033 890 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 ZNF415Q09FC8 603 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 FOXL1Q12952 345 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 XRCC4Q13426 336 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 MPPE1Q53F39 396 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 PLEKHA7Q6IQ23 1121 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 FAM159AQ6UWV7 190 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 ZNF551Q7Z340 670 aaPredicted RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 YRDCQ86U90 279 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 ADGRF4Q8IZF3 695 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 NEXN-AS1Q8NBZ9 246 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 OR52J3Q8NH60 311 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 SENP5Q96HI0 755 aaPredicted RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 CDKN2AIPNLQ96HQ2 116 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 CCDC3Q9BQI4 270 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 FAM234AQ9H0X4 552 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 PORCNQ9H237 461 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 CUEDC2Q9H467 287 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 TMEM231Q9H6L2 316 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 TINAGQ9UJW2 476 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 AMFRQ9UKV5 643 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 OAZ3Q9UMX2 235 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 PLCL2Q9UPR0 1127 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 C15orf41Q9Y2V0 281 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 MATN3O15232 486 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 NVLO15381 856 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 UGDHO60701 494 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 TSPAN15O95858 294 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 CCT6AP40227 531 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 IER3P46695 156 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 COPB1P53618 953 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 RASGEF1BQ0VAM2 473 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 PPP1R8Q12972 351 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 CDSNQ15517 529 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 EFNB3Q15768 340 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 GRTP1Q5TC63 336 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 LIN9Q5TKA1 542 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 ARHGEF16Q5VV41 709 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 PRR27Q6MZM9 219 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 CBLN3Q6UW01 205 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 ARHGAP22Q7Z5H3 698 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 OR5D13Q8NGL4 314 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 C19orf60Q96EN9 201 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 IFT74Q96LB3 600 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 PAIP2Q9BPZ3 127 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 ALKBH7Q9BT30 221 aaPredicted RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 BBS2Q9BXC9 721 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 C1QTNF3Q9BXJ4 246 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 NEUROG2Q9H2A3 272 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 TDRD3Q9H7E2 651 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 Q9H8V8 135 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 AGPAT5Q9NUQ2 364 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 ZNHIT6Q9NWK9 470 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 GAR1Q9NY12 217 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 MRPS33Q9Y291 106 aaKnown RBP3.09□□□□□ -1.91
SMC6-208ENST00000481708 PCDHGB1Q9Y5G3 927 aa3.09□□□□□ -1.91
SMC6-208ENST00000481708 MYH9P35579 1960 aaKnown RBP3.09□□□□□ -1.92
SMC6-208ENST00000481708 TNRC6AQ8NDV7 1962 aaKnown RBP3.09□□□□□ -1.92
SMC6-208ENST00000481708 LAMA3Q16787 3333 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 RNF222A6NCQ9 220 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 ALOX15BO15296 676 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 PSMD3O43242 534 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 ATP6AP2O75787 350 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 NCR1O76036 304 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 BRI3O95415 125 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 BAG3O95817 575 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 IGHV2-70P01814 119 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 OR2T7P0C7T2 308 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 VPREB1P12018 145 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 HPGDP15428 266 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 NCK1P16333 377 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 ENGP17813 658 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 NR4A1P22736 598 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 TNFSF10P50591 281 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 ZXDAP98168 799 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 TBC1D25Q3MII6 688 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 CEP78Q5JTW2 689 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 TSTD2Q5T7W7 516 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms