RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 AARSD1Q9BTE6 412 aaKnown RBP16.07■□□□□ 0.16
RXRB-203ENST00000481441 KLHL31Q9H511 634 aa16.07■□□□□ 0.16
RXRB-203ENST00000481441 COMMD10Q9Y6G5 202 aa16.07■□□□□ 0.16
RXRB-203ENST00000481441 NCKAP5O14513 1909 aa16.07■□□□□ 0.16
RXRB-203ENST00000481441 ATP6AP2A0A1C7CYW4 349 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 ATP6AP2O75787 350 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 ENDOUP21128 410 aaKnown RBP16.06■□□□□ 0.16
RXRB-203ENST00000481441 SLC1A2P43004 574 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 DHX9Q08211 1270 aaKnown RBP16.06■□□□□ 0.16
RXRB-203ENST00000481441 SP140Q13342 867 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 DHX34Q14147 1143 aaKnown RBP16.06■□□□□ 0.16
RXRB-203ENST00000481441 CCNG2Q16589 344 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 FBXL19-AS1Q494R0 122 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 SYT10Q6XYQ8 523 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 RTL4Q6ZR62 310 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 SEM1Q6ZVN7 128 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 TBC1D19Q8N5T2 526 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 ANKRD53Q8N9V6 530 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 OR56A3Q8NH54 315 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 SCYL1Q96KG9 808 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 AICDAQ9GZX7 198 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 SAMD15Q9P1V8 674 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 SPRR3Q9UBC9 169 aa16.06■□□□□ 0.16
RXRB-203ENST00000481441 ZCWPW2A0A1B0GU75 182 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 URADA6NGE7 173 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 HSPB2A8KAH6 182 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 WWP2O00308 870 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 GABRA1P14867 456 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 TIAL1Q01085 375 aaKnown RBP eCLIP16.05■□□□□ 0.16
RXRB-203ENST00000481441 THOC5Q13769 683 aaKnown RBP16.05■□□□□ 0.16
RXRB-203ENST00000481441 SLC10A1Q14973 349 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 HSPB2Q16082 182 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 DUPD1Q68J44 220 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 CASC4Q6P4E1 433 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 DRICH1Q6PGQ1 229 aaPredicted RBP16.05■□□□□ 0.16
RXRB-203ENST00000481441 CHSY3Q70JA7 882 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 GOLM1Q8NBJ4 401 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 RNASE6Q93091 150 aaKnown RBP16.05■□□□□ 0.16
RXRB-203ENST00000481441 NEIL2Q969S2 332 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 ZNF669Q96BR6 464 aaPredicted RBP16.05■□□□□ 0.16
RXRB-203ENST00000481441 LDAHQ9H6V9 325 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 PLEKHF2Q9H8W4 249 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 SEMA4BQ9NPR2 832 aaPredicted RBP16.05■□□□□ 0.16
RXRB-203ENST00000481441 ALKBH4Q9NXW9 302 aa16.05■□□□□ 0.16
RXRB-203ENST00000481441 KIF2AO00139 706 aaPredicted RBP16.04■□□□□ 0.16
RXRB-203ENST00000481441 HCN1O60741 890 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 HAUS5O94927 633 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 TACR1P25103 407 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 DNASE1L1P49184 302 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 ASCL1P50553 236 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 HNRNPFP52597 415 aaKnown RBP16.04■□□□□ 0.16
RXRB-203ENST00000481441 HSD17B7P56937 341 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 REEP5Q00765 189 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 KCTD19Q17RG1 926 aaPredicted RBP16.04■□□□□ 0.16
RXRB-203ENST00000481441 FAM47EQ6ZV65 393 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 PALM2Q8IXS6 379 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 NAXEQ8NCW5 288 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 TMEM52Q8NDY8 209 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 TRPV3Q8NET8 790 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 NUDT8Q8WV74 236 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 SLC5A11Q8WWX8 675 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 NEUROD4Q9HD90 331 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 ADAP2Q9NPF8 381 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 PRTFDC1Q9NRG1 225 aa16.04■□□□□ 0.16
RXRB-203ENST00000481441 TUBA8Q9NY65 449 aaPredicted RBP16.04■□□□□ 0.16
RXRB-203ENST00000481441 TRMT6Q9UJA5 497 aaKnown RBP16.04■□□□□ 0.16
RXRB-203ENST00000481441 FREM3P0C091 2139 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 TRGV5A0A0B4J1U4 118 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 ZNF354AO60765 605 aaPredicted RBP16.03■□□□□ 0.16
RXRB-203ENST00000481441 HIST1H2AGP0C0S8 130 aaPredicted RBP16.03■□□□□ 0.16
RXRB-203ENST00000481441 HIST1H2ADP20671 130 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 BMP5P22003 454 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 CASQ1P31415 396 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 RGS4P49798 205 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 HK2P52789 917 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 RUNX2Q13950 521 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 CSHL1Q14406 222 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 BBS9Q3SYG4 887 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 HSDL2Q6YN16 418 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 CAND1Q86VP6 1230 aaKnown RBP16.03■□□□□ 0.16
RXRB-203ENST00000481441 SREK1Q8WXA9 508 aaKnown RBP16.03■□□□□ 0.16
RXRB-203ENST00000481441 LRRC46Q96FV0 321 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 HIST1H2AHQ96KK5 128 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 SGCZQ96LD1 299 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 HIST1H2AJQ99878 128 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 H2AFJQ9BTM1 129 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 SACM1LQ9NTJ5 587 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 ARL15Q9NXU5 204 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 FBXO5Q9UKT4 447 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 JRKLQ9Y4A0 524 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 PCDHGB3Q9Y5G1 929 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 TLN2Q9Y4G6 2542 aa16.03■□□□□ 0.16
RXRB-203ENST00000481441 DVL2O14641 736 aa16.02■□□□□ 0.16
RXRB-203ENST00000481441 LY6G6DO95868 133 aa16.02■□□□□ 0.16
RXRB-203ENST00000481441 SERPINA6P08185 405 aa16.02■□□□□ 0.16
RXRB-203ENST00000481441 CCL3P10147 92 aa16.02■□□□□ 0.16
RXRB-203ENST00000481441 EPXP11678 715 aa16.02■□□□□ 0.16
RXRB-203ENST00000481441 MAGEA6P43360 314 aa16.02■□□□□ 0.16
RXRB-203ENST00000481441 DCAF7P61962 342 aa16.02■□□□□ 0.16
RXRB-203ENST00000481441 BTN3A2P78410 334 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms