RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 ARHGAP17Q68EM7 881 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 OR4C11Q6IEV9 310 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 LRRC8BQ6P9F7 803 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 CEACAM20Q6UY09 585 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 LRRC70Q7Z2Q7 622 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 PIM3Q86V86 326 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 SFR1Q86XK3 245 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.8□□□□□ -1.64
COPA-203ENST00000481040 KCNH5Q8NCM2 988 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 OR7A2PQ8NGA2 310 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 OR6M1Q8NGM8 313 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 OR13C2Q8NGS9 318 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 HIST1H2ACQ93077 130 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 MCHR2Q969V1 340 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 BPIFA2Q96DR5 249 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 SLC47A1Q96FL8 570 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 NSL1Q96IY1 281 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 C4orf45Q96LM5 186 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 PSKH2Q96QS6 385 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 ZBTB18Q99592 522 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 AGPAT1Q99943 283 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 SHARPINQ9H0F6 387 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 VCX2Q9H322 139 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 FKRPQ9H9S5 495 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 RNF186Q9NXI6 227 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 PLEK2Q9NYT0 353 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 MRTO4Q9UKD2 239 aaKnown RBP4.8□□□□□ -1.64
COPA-203ENST00000481040 POU2F3Q9UKI9 436 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 MYO6Q9UM54 1294 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 RIPK3Q9Y572 518 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 SF3B1O75533 1304 aaKnown RBP eCLIP4.79□□□□□ -1.643e-6■■■■■ 40
COPA-203ENST00000481040 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 HNRNPCL2B2RXH8 293 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 FPGTO14772 594 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 NUDT3O95989 172 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 PRSS2P07478 247 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 HOXC6P09630 235 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 TMEM191BP0C7N4 346 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 PSG1P11464 419 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 MSH3P20585 1137 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 PAX7P23759 505 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 HTR2AP28223 471 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 TMOD1P28289 359 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 PTGFRP43088 359 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 FUT6P51993 359 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 DPTQ07507 201 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 DDX39BQ13838 428 aaKnown RBP4.79□□□□□ -1.64
COPA-203ENST00000481040 SQLEQ14534 574 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 TMEM132DQ14C87 1099 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 EXOSC7Q15024 291 aaKnown RBP4.79□□□□□ -1.64
COPA-203ENST00000481040 ZMYND11Q15326 602 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 FILIP1LQ4L180 1135 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 MPPE1Q53F39 396 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 LYPLAL1Q5VWZ2 237 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 LIPJQ5W064 366 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 ZNF441Q8N8Z8 693 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 COLGALT1Q8NBJ5 622 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 OR13C3Q8NGS6 347 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 NXPE2Q96DL1 559 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 C4orf36Q96KX1 117 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 JPH2Q9BR39 696 aaPredicted RBP4.79□□□□□ -1.64
COPA-203ENST00000481040 CCM2Q9BSQ5 444 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 SLC26A1Q9H2B4 701 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 CPVLQ9H3G5 476 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 ZNF665Q9H7R5 613 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 RBM28Q9NW13 759 aaKnown RBP4.79□□□□□ -1.64
COPA-203ENST00000481040 RDH8Q9NYR8 311 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 ERVK-18Q9QC07 812 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 BCAP29Q9UHQ4 241 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 PILRBQ9UKJ0 227 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 SATB2Q9UPW6 733 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 OR1A2Q9Y585 309 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 COX11Q9Y6N1 276 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 CUX2O14529 1486 aa4.79□□□□□ -1.64
COPA-203ENST00000481040 NSD2O96028 1365 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 UMODL1Q5DID0 1318 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 XKRY2A2RUG3 117 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 CTAGE15A4D2H0 777 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 MTMR11A4FU01 709 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 SERINC4A6NH21 518 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 ZSCAN5BA6NJL1 495 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 SRRM3A6NNA2 597 aaPredicted RBP4.78□□□□□ -1.64
COPA-203ENST00000481040 A8MVM7 634 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 SURF6O75683 361 aaKnown RBP4.78□□□□□ -1.64
COPA-203ENST00000481040 KIAA0754O94854 1291 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 UGT2B4P06133 528 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 ZNF12P17014 697 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 CA6P23280 308 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 ACKR3P25106 362 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 DLSTP36957 453 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 ALDH3B1P43353 468 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 KCNJ4P48050 445 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 CCR4P51679 360 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 CUL2Q13617 745 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 TAF13Q15543 124 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 SRSF7Q16629 238 aaKnown RBP eCLIP4.78□□□□□ -1.64
COPA-203ENST00000481040 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 ZNF528Q3MIS6 628 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 MTX3Q5HYI7 312 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 RTL6Q6ICC9 239 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms