RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 HYKKA2RU49 373 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 HMGB1P1B2RPK0 211 aaPredicted RBP14.63□□□□□ -0.07
HDLBP-238ENST00000479894 STX16-NPEPL1H3BU86 382 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 STX16O14662 325 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 TM9SF1O15321 606 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 TOXO94900 526 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 MYL2P10916 166 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 ATP5F1P24539 256 aaPredicted RBP14.63□□□□□ -0.07
HDLBP-238ENST00000479894 EEF1DP29692 281 aaKnown RBP14.63□□□□□ -0.07
HDLBP-238ENST00000479894 GRK3P35626 688 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 SLC18A1P54219 525 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 PRKAA2P54646 552 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 PRDX1Q06830 199 aaKnown RBP14.63□□□□□ -0.07
HDLBP-238ENST00000479894 NAE1Q13564 534 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 TSTA3Q13630 321 aaPredicted RBP14.63□□□□□ -0.07
HDLBP-238ENST00000479894 CCSMST1Q4G0I0 132 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 TNFAIP8L3Q5GJ75 292 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 LCTLQ6UWM7 567 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 LRRC70Q7Z2Q7 622 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 LAPTM4BQ86VI4 370 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 KLHDC8AQ8IYD2 350 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 PLD6Q8N2A8 252 aaKnown RBP14.63□□□□□ -0.07
HDLBP-238ENST00000479894 UBTD2Q8WUN7 234 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 EXT2Q93063 718 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 MBD6Q96DN6 1003 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 IMMP1LQ96LU5 166 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 ZNF354BQ96LW1 612 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 IL17FQ96PD4 163 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 TUBB6Q9BUF5 446 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 SGPP1Q9BX95 441 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 TSPAN10Q9H1Z9 355 aaPredicted RBP14.63□□□□□ -0.07
HDLBP-238ENST00000479894 KCNJ16Q9NPI9 418 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 GPRC5BQ9NZH0 403 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 CPSF2Q9P2I0 782 aaKnown RBP14.63□□□□□ -0.07
HDLBP-238ENST00000479894 PTBP2Q9UKA9 531 aaKnown RBP14.63□□□□□ -0.07
HDLBP-238ENST00000479894 STK38LQ9Y2H1 464 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 PLLPQ9Y342 182 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 ANGPTL3Q9Y5C1 460 aa14.63□□□□□ -0.07
HDLBP-238ENST00000479894 NCF1BA6NI72 391 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-238ENST00000479894 NCF1CA8MVU1 366 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-238ENST00000479894 KLK8O60259 260 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 H2AFYO75367 372 aaKnown RBP14.62□□□□□ -0.07
HDLBP-238ENST00000479894 NCF1P14598 390 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-238ENST00000479894 CPA3P15088 417 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 CD46P15529 392 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 GNAZP19086 355 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 DNASE1P24855 282 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 RELAQ04206 551 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 MYBPHQ13203 477 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 SETDB1Q15047 1291 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 PFKFB4Q16877 469 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 MUM1Q2TAK8 710 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 WASHC2DQ5SRD0 308 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 H3F3CQ6NXT2 135 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 FIGLAQ6QHK4 219 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 C3P1Q6ZMU1 363 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 EXOC3L1Q86VI1 746 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 C17orf64Q86WR6 236 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 DTWD1Q8N5C7 304 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 LINC01555Q8NAE3 123 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 ARSGQ96EG1 525 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 ATP6V1G3Q96LB4 118 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 CD244Q9BZW8 370 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 PITHD1Q9GZP4 211 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-238ENST00000479894 ATG10Q9H0Y0 220 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 MRPS30Q9NP92 439 aaKnown RBP14.62□□□□□ -0.07
HDLBP-238ENST00000479894 DNAJC11Q9NVH1 559 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 NKIRAS1Q9NYS0 192 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 TMEM216Q9P0N5 145 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 OPTCQ9UBM4 332 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 KLHL20Q9Y2M5 609 aa14.62□□□□□ -0.07
HDLBP-238ENST00000479894 STAB1Q9NY15 2570 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 NKX2-6A6NCS4 301 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 H3BQF6 201 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 UBXN8O00124 270 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 CLGNO14967 610 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 PRPF4O43172 522 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDLBP-238ENST00000479894 PLIN3O60664 434 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 CTAG2O75638 210 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 EPB42P16452 691 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 FBLP22087 321 aaKnown RBP14.61□□□□□ -0.07
HDLBP-238ENST00000479894 MEOX1P50221 254 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 TBPL1P62380 186 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 TUBA3CQ13748 450 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 PCBP2Q15366 365 aaKnown RBP eCLIP14.61□□□□□ -0.079e-6■□□□□ 8.1
HDLBP-238ENST00000479894 ICE2Q659A1 982 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 TUBA3EQ6PEY2 450 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 TMEM205Q6UW68 189 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 CXXC5Q7LFL8 322 aaKnown RBP14.61□□□□□ -0.07
HDLBP-238ENST00000479894 CAMKMTQ7Z624 323 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 THOC6Q86W42 341 aaKnown RBP14.61□□□□□ -0.07
HDLBP-238ENST00000479894 PRIMA1Q86XR5 153 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 SPNS2Q8IVW8 549 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 CLYBLQ8N0X4 340 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 OR2L3Q8NG85 312 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 OR2A1Q8NGT9 310 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 MVB12AQ96EY5 273 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 C18orf12Q96KH6 178 aa14.61□□□□□ -0.07
HDLBP-238ENST00000479894 UTP23Q9BRU9 249 aaKnown RBP14.61□□□□□ -0.07
HDLBP-238ENST00000479894 TGIF2Q9GZN2 237 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms