RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 LYRM4Q9HD34 91 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 SERHLQ9NQF3 203 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 PRDM9Q9NQV7 894 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 MS4A12Q9NXJ0 267 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 TAS2R7Q9NYW3 318 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 ADA2Q9NZK5 511 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 TMEM9Q9P0T7 183 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 TMEM181Q9P2C4 612 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 ABCD2Q9UBJ2 740 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 BTBD3Q9Y2F9 522 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 AP3M1Q9Y2T2 418 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 SPACA6W5XKT8 324 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 RALGAPA1Q6GYQ0 2036 aa11.34□□□□□ -0.59
TM9SF4-206ENST00000479591 FITM1A5D6W6 292 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 PROM1O43490 865 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 GALR3O60755 368 aaPredicted RBP11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 DNAJA2O60884 412 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 ANP32DO95626 131 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 SLC6A2P23975 617 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 BUD31P41223 144 aaPredicted RBP11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 ALDH9A1P49189 494 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 SEPHS1P49903 392 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 SLC7A2P52569 658 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 FAM53BQ14153 422 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 GRM7Q14831 915 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 ZNF385BQ569K4 471 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 PIGGQ5H8A4 983 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 SNAP47Q5SQN1 464 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 NDUFAF5Q5TEU4 345 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 ANKRD26P1Q6NSI1 321 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 NET1Q7Z628 596 aaPredicted RBP11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 EFCAB3Q8N7B9 438 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 FAM47BQ8NA70 645 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 PRSS33Q8NF86 280 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 OR8J3Q8NGG0 315 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 ANKRD27Q96NW4 1050 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 GBP5Q96PP8 586 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 PANX1Q96RD7 426 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 EDEM2Q9BV94 578 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 PAIP1Q9H074 479 aaKnown RBP11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 CLK4Q9HAZ1 481 aaKnown RBP11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 FANCEQ9HB96 536 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 TMEM9BQ9NQ34 198 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 IRAK4Q9NWZ3 460 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 TEX10Q9NXF1 929 aaPredicted RBP11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 SLAMF8Q9P0V8 285 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 FTSJ1Q9UET6 329 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 SLC7A8Q9UHI5 535 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 ATXN7L1Q9ULK2 861 aaPredicted RBP11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 DAPP1Q9UN19 280 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 PCDHGB4Q9UN71 923 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 L3MBTL1Q9Y468 752 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 PCDHA9Q9Y5H5 950 aa11.33□□□□□ -0.6
TM9SF4-206ENST00000479591 GOLGA4Q13439 2230 aaKnown RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 DMDP11532 3685 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 TRBV5-3A0A0A0MS03 114 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 A0A1W2PR48 441 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 HYKKA2RU49 373 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 A8MU76 341 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 NTN3O00634 580 aaPredicted RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 CDX4O14627 284 aaPredicted RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 FOXD2O60548 495 aaPredicted RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 ZCCHC18P0CG32 403 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 NR2F6P10588 404 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 ME2P23368 584 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 TLX1P31314 330 aaPredicted RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 PLA2G5P39877 138 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 LIM2P55344 173 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 EEFSECP57772 596 aaKnown RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 ELF3P78545 371 aaPredicted RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 TNFRSF17Q02223 184 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 ACY1Q03154 408 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 TRA2AQ13595 282 aaKnown RBP eCLIP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 CAPRIN1Q14444 709 aaKnown RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 SF3A2Q15428 464 aaKnown RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 CSRP2Q16527 193 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 MUM1Q2TAK8 710 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 FAM214AQ32MH5 1076 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 RUNDC3AQ59EK9 446 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 YOD1Q5VVQ6 348 aaPredicted RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 NANOGP8Q6NSW7 305 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 ZNF574Q6ZN55 896 aaPredicted RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 DGLUCYQ7Z3D6 616 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 ARHGAP22Q7Z5H3 698 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 ANKRD46Q86W74 232 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 SLC15A3Q8IY34 581 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 KIAA2013Q8IYS2 634 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 FAM13CQ8NE31 585 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 GOT1L1Q8NHS2 421 aaPredicted RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 DNAJB14Q8TBM8 379 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 TMEM125Q96AQ2 219 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 CLPTM1LQ96KA5 538 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 GFM1Q96RP9 751 aaKnown RBP11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 MAPKAP1Q9BPZ7 522 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 SLC39A3Q9BRY0 314 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 SYNDIG1Q9H7V2 258 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 NANOGQ9H9S0 305 aa11.32□□□□□ -0.6
TM9SF4-206ENST00000479591 STARD5Q9NSY2 213 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms