RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 OR9Q2Q8NGE9 314 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 PDXPQ96GD0 296 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 NLNQ9BYT8 704 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 CLN6Q9NWW5 311 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 FTSJ1Q9UET6 329 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 MN1Q10571 1320 aaPredicted RBP23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 PCDH17O14917 1159 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 DSCR3O14972 297 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 TLL1O43897 1013 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 MOSPD3O75425 235 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 PTHP01270 115 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 KLK1P06870 262 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 ETV6P41212 452 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 TMED10P49755 219 aaKnown RBP23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 WDR5P61964 334 aaKnown RBP23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 STARD3Q14849 445 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 PTGES3Q15185 160 aaKnown RBP23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 SORCS1Q8WY21 1168 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 TCEAL4Q96EI5 215 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 YME1L1Q96TA2 773 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 HCFC1R1Q9NWW0 138 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 SPATA7Q9P0W8 599 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 ACSL6Q9UKU0 697 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 IFT52Q9Y366 437 aa23.52■■□□□ 1.35
SYNGAP1-206ENST00000479510 SNX4O95219 450 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 PTTG1O95997 202 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 SOD1P00441 154 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 PTPN2P17706 415 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 NUDT6P53370 316 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 CRISP1P54107 249 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 GRIN2CQ14957 1233 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 LCTLQ6UWM7 567 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 KRT78Q8N1N4 520 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 B3GNT7Q8NFL0 401 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 WFIKKN2Q8TEU8 576 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 MYLIPQ8WY64 445 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 RACGAP1Q9H0H5 632 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 A4GALTQ9NPC4 353 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 ZNF229Q9UJW7 825 aa23.51■■□□□ 1.35
SYNGAP1-206ENST00000479510 PNMA8CA0A1B0GUJ8 204 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 SLC9A3R1O14745 358 aaPredicted RBP23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 SEMA3DO95025 777 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 DBTP11182 482 aaKnown RBP23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 UGT2B15P54855 530 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 DEFB115Q30KQ5 88 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 COLEC12Q5KU26 742 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 FRMPD2BQ6IN97 320 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 ZNF770Q6IQ21 691 aaPredicted RBP23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 C6orf62Q9GZU0 229 aaPredicted RBP23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 MIEF1Q9NQG6 463 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 RAB23Q9ULC3 237 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 DSPPQ9NZW4 1301 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 ADAP00813 363 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 GBAP04062 536 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 IL3P08700 152 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 SOAT1P35610 550 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 CASP9P55211 416 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 TMIGD1Q6UXZ0 262 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 TRAPPC5Q8IUR0 188 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 AQP11Q8NBQ7 271 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 VN1R2Q8NFZ6 395 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 NEURL3Q96EH8 262 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 SLC6A16Q9GZN6 736 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 GPR34Q9UPC5 381 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 CFL2Q9Y281 166 aa23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 CFAP20Q9Y6A4 193 aaKnown RBP23.5■■□□□ 1.35
SYNGAP1-206ENST00000479510 J3KTA2 159 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 MED26O95402 600 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 PRNPP04156 253 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 ACADLP28330 430 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 GRK5P34947 590 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 SOX6P35712 828 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 KLHL17Q6TDP4 642 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 SLC9B2Q86UD5 537 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 TAGAPQ8N103 731 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 FAM46DQ8NEK8 389 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 APOBEC4Q8WW27 367 aaKnown RBP23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 OR5P2Q8WZ92 322 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 OR2AG1Q9H205 316 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 TRIM39Q9HCM9 518 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 ABCB10Q9NRK6 738 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 TMEM39AQ9NV64 488 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 SAGE1Q9NXZ1 904 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 TAAR2Q9P1P5 351 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 MKLN1Q9UL63 735 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 DOCK6Q96HP0 2047 aa23.49■■□□□ 1.35
SYNGAP1-206ENST00000479510 SAP18O00422 153 aaKnown RBP23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 OXSR1O95747 527 aaPredicted RBP23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 CHMP24386 653 aa23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 SLC15A1P46059 708 aa23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 SNRPGP62308 76 aaKnown RBP23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 TSTA3Q13630 321 aaPredicted RBP23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 MAPK11Q15759 364 aa23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 PLAG1Q6DJT9 500 aa23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 OR5AK3PQ8NH89 298 aa23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 OR51E2Q9H255 320 aa23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 NMNAT1Q9HAN9 279 aaPredicted RBP23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 NDOR1Q9UHB4 597 aa23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 IRAK3Q9Y616 596 aa23.48■■□□□ 1.35
SYNGAP1-206ENST00000479510 LOC100506127A0A0U1RQW1 187 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms