RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 SF3A2Q15428 464 aaKnown RBP12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 TSC22D1Q15714 1073 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 SV2CQ496J9 727 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 METAP1DQ6UB28 335 aaPredicted RBP12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 ZNF600Q6ZNG1 722 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 EIF3MQ7L2H7 374 aaKnown RBP12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 PLPP6Q8IY26 295 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 TMEM105Q8N8V8 129 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 OR2T11Q8NH01 316 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 CLEC4CQ8WTT0 213 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 FGF14Q92915 247 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 UBE2FQ969M7 185 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 DIRAS2Q96HU8 199 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 CNPPD1Q9BV87 410 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 FICDQ9BVA6 458 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 GSX2Q9BZM3 304 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 ELOVL6Q9H5J4 265 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 REEP1Q9H902 201 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 RDH8Q9NYR8 311 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 SAMHD1Q9Y3Z3 626 aaKnown RBP12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 YIPF1Q9Y548 306 aa12.62□□□□□ -0.39
CNKSR3-204ENST00000479339 NOTCH4Q99466 2003 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 MTMR11A4FU01 709 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 PCDH17O14917 1159 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 KPNA5O15131 536 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 LYRM1O43325 122 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 GMDSO60547 372 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 IL1AP01583 271 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 C9P02748 559 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 SCG5P05408 212 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 SLC2A4P14672 509 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 PCSK2P16519 638 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 CEBPBP17676 345 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ITGALP20701 1170 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 LHCGRP22888 699 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ADRA1AP35348 466 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 MAPKAPK2P49137 400 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 CDKN2DP55273 166 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ITGA1P56199 1179 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 PLD1Q13393 1074 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 KIAA0040Q15053 153 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ZMYND11Q15326 602 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 MAPKAPK3Q16644 382 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ZNF789Q5FWF6 425 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 LUZP2Q86TE4 346 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 METTL23Q86XA0 190 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 CILP2Q8IUL8 1156 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 LRRC52Q8N7C0 313 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 SRFBP1Q8NEF9 429 aaKnown RBP12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 OR4F6Q8NGB9 312 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 OR56A4Q8NGH8 313 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 NETO1Q8TDF5 533 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ING5Q8WYH8 240 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 AP3S1Q92572 193 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 NT5C3BQ969T7 300 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 SLC25A46Q96AG3 418 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 UPRTQ96BW1 309 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 FAM120BQ96EK7 910 aaKnown RBP12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 P2RY13Q9BPV8 354 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 RPP25Q9BUL9 199 aaKnown RBP12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 SEMA4BQ9NPR2 832 aaPredicted RBP12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 GPR83Q9NYM4 423 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 RPS6KA6Q9UK32 745 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ABCG2Q9UNQ0 655 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 COPS3Q9UNS2 423 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 LIPT1Q9Y234 373 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 SH3D21A4FU49 640 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 INMT-MINDY4F8WBC2 141 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 PMPCBO75439 489 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ECI2O75521 394 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 TP53P04637 393 aaPredicted RBP12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 HMBSP08397 361 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 CLEC2LP0C7M8 214 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 LCP1P13796 627 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 PSMA1P25786 263 aaKnown RBP12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 CYP4F2P78329 520 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ABATP80404 500 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ABRQ12979 859 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ZNF169Q14929 603 aaPredicted RBP12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 OR4D1Q15615 310 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 SSX1Q16384 188 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 MICAQ29983 383 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 SYPL2Q5VXT5 272 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 DEFB106AQ8N104 65 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 IPMKQ8NFU5 416 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 OR52K2Q8NGK3 314 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 STAG3L4Q8TBR4 150 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 CREB3L4Q8TEY5 395 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 RIT1Q92963 219 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 FOPNLQ96NB1 174 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 EPYCQ99645 322 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 RTP3Q9BQQ7 232 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 WACQ9BTA9 647 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 SIK2Q9H0K1 926 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 MIXL1Q9H2W2 232 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 CRISPLD1Q9H336 500 aa12.61□□□□□ -0.39
CNKSR3-204ENST00000479339 ACTL8Q9H568 366 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms