RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CPSF2Q9P2I0 782 aaKnown RBP1.79□□□□□ -2.12
HPS3-205ENST00000478525 RCOR3Q9P2K3 495 aaPredicted RBP1.79□□□□□ -2.12
HPS3-205ENST00000478525 VPS28Q9UK41 221 aa1.79□□□□□ -2.12
HPS3-205ENST00000478525 NEU3Q9UQ49 428 aa1.79□□□□□ -2.12
HPS3-205ENST00000478525 RNF24Q9Y225 148 aa1.79□□□□□ -2.12
HPS3-205ENST00000478525 GAKO14976 1311 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 SULT2A1Q06520 285 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 ZNF33BQ06732 778 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 MOXD1Q6UVY6 613 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 SMPDL3AQ92484 453 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 EXOC4Q96A65 974 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 SPSB1Q96BD6 273 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 SNX25Q9H3E2 840 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 FZD8Q9H461 694 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 DPEP2Q9H4A9 486 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 NTN4Q9HB63 628 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 PATZ1Q9HBE1 687 aaKnown RBP1.78□□□□□ -2.12
HPS3-205ENST00000478525 KLRF1Q9NZS2 232 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 ANAPC2Q9UJX6 822 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 RAB26Q9ULW5 256 aa1.78□□□□□ -2.12
HPS3-205ENST00000478525 TCRBV21S2A2A0A5A6 115 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 PRSS46E5RG02 174 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 PGRMC2O15173 223 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 FGF19O95750 216 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 PENKP01210 267 aaPredicted RBP1.77□□□□□ -2.13
HPS3-205ENST00000478525 OR52Z1P0C646 297 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 DLATP10515 647 aaKnown RBP1.77□□□□□ -2.13
HPS3-205ENST00000478525 EEF2P13639 858 aaKnown RBP1.77□□□□□ -2.13
HPS3-205ENST00000478525 CAPN3P20807 821 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 HNRNPA2B1P22626 353 aaKnown RBP1.77□□□□□ -2.13
HPS3-205ENST00000478525 PPOXP50336 477 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 RBPJQ06330 500 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 IL10RBQ08334 325 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 STK4Q13043 487 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 BECN1Q14457 450 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 PPP1R3AQ16821 1122 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.77□□□□□ -2.13
HPS3-205ENST00000478525 KRT39Q6A163 491 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 CCDC70Q6NSX1 233 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 GCNT7Q6ZNI0 430 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 H1FOOQ8IZA3 346 aaPredicted RBP1.77□□□□□ -2.13
HPS3-205ENST00000478525 SAMD12Q8N8I0 201 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 CAMKVQ8NCB2 501 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 SECISBP2LQ93073 1101 aaKnown RBP1.77□□□□□ -2.13
HPS3-205ENST00000478525 TREX2Q9BQ50 279 aaPredicted RBP1.77□□□□□ -2.13
HPS3-205ENST00000478525 C5orf66Q9H5L9 145 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 CLIC5Q9NZA1 410 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 PCDHGB4Q9UN71 923 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 SH3GLB1Q9Y371 365 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 MYO10Q9HD67 2058 aa1.77□□□□□ -2.13
HPS3-205ENST00000478525 TNRQ92752 1358 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 TRAV18A0A075B6X5 111 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 hCG_1809904A0A1W2PP81 198 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 A0A1W2PPE2 198 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 A0A1W2PR64 198 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 B4DXG7 233 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 GPAA1O43292 621 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 WISP3O95389 354 aaPredicted RBP1.76□□□□□ -2.13
HPS3-205ENST00000478525 PSG2P11465 335 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 PORP16435 677 aaPredicted RBP1.76□□□□□ -2.13
HPS3-205ENST00000478525 EFNA3P52797 238 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 OVGP1Q12889 678 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 DDX10Q13206 875 aaKnown RBP1.76□□□□□ -2.13
HPS3-205ENST00000478525 C14orf28Q4W4Y0 310 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 PAN3Q58A45 887 aaKnown RBP1.76□□□□□ -2.13
HPS3-205ENST00000478525 FAM205BPQ63HN1 556 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 C2orf66Q6UXQ4 117 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 MAATS1Q7Z4T9 603 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 GPR141Q7Z602 305 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 TGIF2LYQ8IUE0 185 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 APOBEC3FQ8IUX4 373 aaKnown RBP1.76□□□□□ -2.13
HPS3-205ENST00000478525 SMC5Q8IY18 1101 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 APCDD1Q8J025 514 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 SLC43A2Q8N370 569 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 CLEC1AQ8NC01 280 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 SRSF12Q8WXF0 261 aaKnown RBP1.76□□□□□ -2.13
HPS3-205ENST00000478525 HDAC11Q96DB2 347 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 MPP4Q96JB8 637 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 MXD3Q9BW11 206 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 NCKAP1Q9Y2A7 1128 aa1.76□□□□□ -2.13
HPS3-205ENST00000478525 OR5H15A6NDH6 313 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 TMCO5BA8MYB1 307 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 ZNF732B4DXR9 585 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 TRIM49D1C9J1S8 452 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 ADAM20O43506 726 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 SLC35E2P0CK97 266 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 SSTR1P30872 391 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 MC5RP33032 325 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 OR3A3P47888 321 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 CSE1LP55060 971 aaKnown RBP1.75□□□□□ -2.13
HPS3-205ENST00000478525 RILPL1Q5EBL4 403 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 OTPQ5XKR4 325 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 ENPP7Q6UWV6 458 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 C17orf107Q6ZR85 190 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 C1orf122Q6ZSJ8 110 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 ZNF677Q86XU0 584 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 CROCCP3Q8IVE0 287 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 ZNF671Q8TAW3 534 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 SLC26A7Q8TE54 656 aa1.75□□□□□ -2.13
HPS3-205ENST00000478525 C16orf74Q96GX8 76 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms