RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ROGDIQ9GZN7 287 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 ZNF160Q9HCG1 818 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 MLXIPLQ9NP71 852 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 TNFRSF12AQ9NP84 129 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 KCNK9Q9NPC2 374 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 FBXW2Q9UKT8 454 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 DAPP1Q9UN19 280 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 SLC12A4Q9UP95 1085 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 STK38LQ9Y2H1 464 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 ZFYVE26Q68DK2 2539 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 PCSK5Q92824 1860 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 HEATR5BQ9P2D3 2071 aa9.67□□□□□ -0.86
HDAC6-222ENST00000478095 IGHV1-45A0A0A0MS14 117 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 NSG1A0A0A6YYJ2 146 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 WDR91A4D1P6 747 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 GOLGA6L10A6NI86 522 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 MKRN2OSH3BPM6 223 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 K7EM74 188 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 TRIM13O60858 407 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 CRCPO75575 148 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 SEC24DO94855 1032 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-222ENST00000478095 ESRRBO95718 433 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 KRT6AP02538 564 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 KRT6BP04259 564 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 CHN1P15882 459 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 H2AFXP16104 143 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-222ENST00000478095 IL10P22301 178 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 ITGA3P26006 1051 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 ETV4P43268 484 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 KRT6CP48668 564 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 RRADP55042 308 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 SLAMF1Q13291 335 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 CUL3Q13618 768 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 MPP2Q14168 576 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 PCOLCEQ15113 449 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 NSDHLQ15738 373 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 TMEM205Q6UW68 189 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 ANKRD37Q7Z713 158 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 CLNKQ7Z7G1 428 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 ANKRD42Q8N9B4 389 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 FDCSPQ8NFU4 85 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 NACC2Q96BF6 587 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 ABHD17AQ96GS6 310 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 PTCHD1Q96NR3 888 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 SERPINI1Q99574 410 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 USB1Q9BQ65 265 aaKnown RBP9.66□□□□□ -0.86
HDAC6-222ENST00000478095 NPLQ9BXD5 320 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-222ENST00000478095 ZNF717Q9BY31 904 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-222ENST00000478095 SLC29A3Q9BZD2 475 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 CLK4Q9HAZ1 481 aaKnown RBP9.66□□□□□ -0.86
HDAC6-222ENST00000478095 NECTIN3Q9NQS3 549 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 ZNF71Q9NQZ8 489 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-222ENST00000478095 ARGLU1Q9NWB6 273 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-222ENST00000478095 FIS1Q9Y3D6 152 aa9.66□□□□□ -0.86
HDAC6-222ENST00000478095 LOC102723996A0A087X1L8 192 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 MYOCOSA0A1B0GUC4 107 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 CYR61O00622 381 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 TMPRSS11DO60235 418 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 PRMT3O60678 531 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 ULK1O75385 1050 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 PRKRAO75569 313 aaKnown RBP9.65□□□□□ -0.86
HDAC6-222ENST00000478095 SCELO95171 688 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 HPP00738 406 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 PDGFAP04085 211 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 ENO1P06733 434 aaKnown RBP9.65□□□□□ -0.86
HDAC6-222ENST00000478095 CHRNGP07510 517 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 BPGMP07738 259 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 CELA2AP08217 269 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 CPN2P22792 545 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 SERPINB3P29508 390 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 BSGP35613 385 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 SERPINB4P48594 390 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 HNRNPH2P55795 449 aaKnown RBP9.65□□□□□ -0.86
HDAC6-222ENST00000478095 MAGOHP61326 146 aaKnown RBP9.65□□□□□ -0.86
HDAC6-222ENST00000478095 HMGCS1Q01581 520 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 GUCA2AQ02747 115 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 Q0VFX4 171 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 ASPHQ12797 758 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 SFT2D3Q587I9 215 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 CLEC6AQ6EIG7 209 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 NDUFAF7Q7L592 441 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 CPEB2Q7Z5Q1 589 aaKnown RBP9.65□□□□□ -0.86
HDAC6-222ENST00000478095 CUZD1Q86UP6 607 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 NUDT13Q86X67 352 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 GALNT16Q8N428 558 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 PLPP5Q8NEB5 264 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 C9orf43Q8TAL5 461 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-222ENST00000478095 AGR3Q8TD06 166 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 MGARPQ8TDB4 240 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 WBP1Q96G27 269 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 VPS50Q96JG6 964 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 SLC25A23Q9BV35 468 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 NUDT9Q9BW91 350 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 ACPTQ9BZG2 426 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 STMN4Q9H169 189 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-222ENST00000478095 TMBIM4Q9HC24 238 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 LYRM4Q9HD34 91 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 SSU72Q9NP77 194 aaKnown RBP9.65□□□□□ -0.86
HDAC6-222ENST00000478095 ATP13A2Q9NQ11 1180 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 PRTFDC1Q9NRG1 225 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms