RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 OR1F2PQ96R84 312 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 CSF3RQ99062 836 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 RIC8BQ9NVN3 520 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 MCM8Q9UJA3 840 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 DLGAP4Q9Y2H0 992 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 ATG4BQ9Y4P1 393 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 TRPC5OSA6NMA1 111 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 PCDH7O60245 1069 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 PEX11AO75192 247 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 JRKO75564 520 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 ZGLP1P0C6A0 271 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 FAM58BPP0C7Q3 252 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 RNH1P13489 461 aaKnown RBP18.81■□□□□ 0.6
ACTB-210ENST00000477812 LIFP15018 202 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 ACPPP15309 386 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 IL10P22301 178 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 RAB38P57729 211 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 RPL38P63173 70 aaKnown RBP18.81■□□□□ 0.6
ACTB-210ENST00000477812 ATP6AP1LQ52LC2 224 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 C6orf136Q5SQH8 315 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 CCNYL2Q5T2Q4 361 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 FAM69BQ5VUD6 431 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 MLIPQ5VWP3 458 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 NOXRED1Q6NXP6 359 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 LARP4Q71RC2 724 aaKnown RBP eCLIP18.81■□□□□ 0.6
ACTB-210ENST00000477812 VASH2Q86V25 355 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 LRRC34Q8IZ02 419 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.81■□□□□ 0.6
ACTB-210ENST00000477812 KCNE4Q8WWG9 221 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 TUBGCP3Q96CW5 907 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 GPR87Q9BY21 358 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 RBCK1Q9BYM8 510 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 WDR55Q9H6Y2 383 aaPredicted RBP18.81■□□□□ 0.6
ACTB-210ENST00000477812 AKTIPQ9H8T0 292 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 FGFR1OP2Q9NVK5 253 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 C14orf105Q9NVL8 296 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 LYARQ9NX58 379 aaKnown RBP18.81■□□□□ 0.6
ACTB-210ENST00000477812 IL17BQ9UHF5 180 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 NXT1Q9UKK6 140 aaKnown RBP18.81■□□□□ 0.6
ACTB-210ENST00000477812 NUP210LQ5VU65 1888 aa18.81■□□□□ 0.6
ACTB-210ENST00000477812 A0A1W2PR48 441 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 FAM227AF5H4B4 570 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 SEC22BO75396 215 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 TGDSO95455 350 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 UMODP07911 640 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 FHP07954 510 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 WT1P19544 449 aaPredicted RBP18.8■□□□□ 0.6
ACTB-210ENST00000477812 PTPN4P29074 926 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 EIF2S3P41091 472 aaKnown RBP18.8■□□□□ 0.6
ACTB-210ENST00000477812 HNRNPFP52597 415 aaKnown RBP18.8■□□□□ 0.6
ACTB-210ENST00000477812 MAPK12P53778 367 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 TNFRSF17Q02223 184 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 GALNTL6Q49A17 601 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 SLC9B1Q4ZJI4 515 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 CGB2Q6NT52 195 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 CYP20A1Q6UW02 462 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 EPGNQ6UW88 154 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 GPR180Q86V85 440 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 LAPTM4BQ86VI4 370 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 TMEM52Q8NDY8 209 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 OR2Y1Q8NGV0 311 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 ADAMTS18Q8TE60 1221 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 NAF1Q96HR8 494 aaKnown RBP18.8■□□□□ 0.6
ACTB-210ENST00000477812 EBPLQ9BY08 206 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 DPH1Q9BZG8 443 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 TEX10Q9NXF1 929 aaPredicted RBP18.8■□□□□ 0.6
ACTB-210ENST00000477812 GPN3Q9UHW5 284 aaPredicted RBP18.8■□□□□ 0.6
ACTB-210ENST00000477812 PHF11Q9UIL8 331 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 TCFL5Q9UL49 500 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 FARSAQ9Y285 508 aaKnown RBP18.8■□□□□ 0.6
ACTB-210ENST00000477812 TMED5Q9Y3A6 229 aa18.8■□□□□ 0.6
ACTB-210ENST00000477812 POLR3HQ9Y535 204 aaPredicted RBP18.8■□□□□ 0.6
ACTB-210ENST00000477812 TAF4O00268 1085 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 POLR3GO15318 223 aaPredicted RBP18.79■□□□□ 0.6
ACTB-210ENST00000477812 PROM1O43490 865 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 VPS4BO75351 444 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 AIFM1O95831 613 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 RECKO95980 971 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 TACR1P25103 407 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 EPHA3P29320 983 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 RPS18P62269 152 aaKnown RBP18.79■□□□□ 0.6
ACTB-210ENST00000477812 OCA2Q04671 838 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 KLC1Q07866 573 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 ERV3-1Q14264 604 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 SMU1Q2TAY7 513 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 C18orf63Q68DL7 685 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 OGFOD2Q6N063 350 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 FAM47BQ8NA70 645 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 STON2Q8WXE9 905 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 MIEF2Q96C03 454 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 TM4SF18Q96CE8 201 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 YIPF2Q9BWQ6 316 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 ACTL8Q9H568 366 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 GPN2Q9H9Y4 310 aaPredicted RBP18.79■□□□□ 0.6
ACTB-210ENST00000477812 MS4A12Q9NXJ0 267 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 ASIC5Q9NY37 505 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 FBXW2Q9UKT8 454 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 CLDN16Q9Y5I7 305 aa18.79■□□□□ 0.6
ACTB-210ENST00000477812 ARHGAP10A1A4S6 786 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 PRKRAO75569 313 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms