RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ZNF517Q6ZMY9 492 aaPredicted RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 Q6ZSR9 355 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 MAVSQ7Z434 540 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 DTX1Q86Y01 620 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 CA13Q8N1Q1 262 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 ZCCHC7Q8N3Z6 543 aaKnown RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 EFCAB3Q8N7B9 438 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 SNIP1Q8TAD8 396 aaKnown RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 CHTF18Q8WVB6 975 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 NKD1Q969G9 470 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 PPP3R2Q96LZ3 170 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 NPLQ9BXD5 320 aaPredicted RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 DDX31Q9H8H2 851 aaKnown RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 AKIRIN1Q9H9L7 192 aaPredicted RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 MEAF6Q9HAF1 191 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 C1orf109Q9NX04 203 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 LYARQ9NX58 379 aaKnown RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 ADAM29Q9UKF5 820 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 CROTQ9UKG9 612 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 POLR3HQ9Y535 204 aaPredicted RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 SDHDO14521 159 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 CHST10O43529 356 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 TMPRSS11DO60235 418 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 SEC22BO75396 215 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 KLK1P06870 262 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 RNH1P13489 461 aaKnown RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 TPP2P29144 1249 aaPredicted RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 DLSTP36957 453 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 EIF2S3P41091 472 aaKnown RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 XCR1P46094 333 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 MAPK12P53778 367 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 HNRNPH2P55795 449 aaKnown RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 GNGT1P63211 74 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 DNASE1L3Q13609 305 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 TGIF1Q15583 401 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 CCNYL2Q5T2Q4 361 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 VWA5B1Q5TIE3 1220 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 MLIPQ5VWP3 458 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 ZC3H7AQ8IWR0 971 aaKnown RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 FAM47BQ8NA70 645 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 OR51Q1Q8NH59 317 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 ADAMTS18Q8TE60 1221 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 KCNE4Q8WWG9 221 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 FGF11Q92914 225 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 KIAA1143Q96AT1 154 aaPredicted RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 PEX11GQ96HA9 241 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 NAF1Q96HR8 494 aaKnown RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 CLK4Q9HAZ1 481 aaKnown RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 NPHS2Q9NP85 383 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 MKKSQ9NPJ1 570 aaPredicted RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 C14orf105Q9NVL8 296 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 ZNF282Q9UDV7 671 aaPredicted RBP14.47□□□□□ -0.09
SEC13-215ENST00000477547 PHF11Q9UIL8 331 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 MCM8Q9UJA3 840 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 PADI2Q9Y2J8 665 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 SPACA6W5XKT8 324 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 PTPRQQ9UMZ3 2332 aa14.47□□□□□ -0.09
SEC13-215ENST00000477547 GOLGA8QA0A0J9YX86 632 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 GNG14A0A1W2PPG7 69 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 GOLGA8OA6NCC3 632 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 GOLGA8NF8WBI6 632 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 PSMD12O00232 456 aaPredicted RBP14.46□□□□□ -0.09
SEC13-215ENST00000477547 DIAPH2O60879 1101 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 DNAJB6O75190 326 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 PEX11AO75192 247 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 VPS4BO75351 444 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 MYO1DO94832 1006 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 ONECUT2O95948 504 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 ALOX15P16050 662 aaPredicted RBP14.46□□□□□ -0.09
SEC13-215ENST00000477547 TCN2P20062 427 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 LIM2P55344 173 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 RAB38P57729 211 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 RAE1P78406 368 aaKnown RBP14.46□□□□□ -0.09
SEC13-215ENST00000477547 TNFRSF17Q02223 184 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 OCA2Q04671 838 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 ZNF763Q0D2J5 394 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 CLN3Q13286 438 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 SLAMF1Q13291 335 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 RUNX2Q13950 521 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 OVCH1Q7RTY7 1134 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 VASH2Q86V25 355 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 PRSS58Q8IYP2 241 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 LRRC34Q8IZ02 419 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 ENDOVQ8N8Q3 282 aaKnown RBP14.46□□□□□ -0.09
SEC13-215ENST00000477547 FNDC5Q8NAU1 212 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 ZNF248Q8NDW4 579 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 CDC26Q8NHZ8 85 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 THOC1Q96FV9 657 aaKnown RBP14.46□□□□□ -0.09
SEC13-215ENST00000477547 METTL2AQ96IZ6 378 aaKnown RBP14.46□□□□□ -0.09
SEC13-215ENST00000477547 CSF3RQ99062 836 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 MAPKAP1Q9BPZ7 522 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 C1orf50Q9BV19 199 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 SLC26A1Q9H2B4 701 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 GPN2Q9H9Y4 310 aaPredicted RBP14.46□□□□□ -0.09
SEC13-215ENST00000477547 LYRM4Q9HD34 91 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 NXT1Q9UKK6 140 aaKnown RBP14.46□□□□□ -0.09
SEC13-215ENST00000477547 FBXW2Q9UKT8 454 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 DAPP1Q9UN19 280 aa14.46□□□□□ -0.09
SEC13-215ENST00000477547 IGLV3-12A0A075B6K2 115 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 LOC101059948A0A1B0GTJ6 334 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms