RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SPRR3Q9UBC9 169 aa10.52□□□□□ -0.73
BRCA1-213ENST00000476777 TCRBV7S3A2A0A539 114 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 TUBAL3A6NHL2 446 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 WWP2O00308 870 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 DVL2O14641 736 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 AVILO75366 819 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 C8GP07360 202 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 PAMP19021 973 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 BMP5P22003 454 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 PCSK6P29122 969 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 DNASE1L1P49184 302 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 NKX6-1P78426 367 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-213ENST00000476777 PCBP2Q15366 365 aaKnown RBP eCLIP10.51□□□□□ -0.732e-7■■■□□ 17.1
BRCA1-213ENST00000476777 PHKG1Q16816 387 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 CATSPEREQ5SY80 951 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 SHEQ5VZ18 495 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 FBXW10Q5XX13 1052 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 POMZP3Q6PJE2 187 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 RTL4Q6ZR62 310 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 FAM47EQ6ZV65 393 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 SLC13A5Q86YT5 568 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-213ENST00000476777 SYCE1Q8N0S2 351 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 TBC1D19Q8N5T2 526 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 ANKRD53Q8N9V6 530 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 GOLM1Q8NBJ4 401 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 OR56A3Q8NH54 315 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 PYCR2Q96C36 320 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 LRRC46Q96FV0 321 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 COX4I2Q96KJ9 171 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 SGCZQ96LD1 299 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 AICDAQ9GZX7 198 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 SEMA4BQ9NPR2 832 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-213ENST00000476777 BEX4Q9NWD9 120 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-213ENST00000476777 TRMT1Q9NXH9 659 aaKnown RBP10.51□□□□□ -0.73
BRCA1-213ENST00000476777 TUBA8Q9NY65 449 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-213ENST00000476777 KIAA1549Q9HCM3 1950 aa10.51□□□□□ -0.73
BRCA1-213ENST00000476777 NCKAP5O14513 1909 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 USF3Q68DE3 2245 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 TRGV5A0A0B4J1U4 118 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 URADA6NGE7 173 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 ZNF354AO60765 605 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 IPO7O95373 1038 aaKnown RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 CCL3P10147 92 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 TPSB2P20231 275 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 CEACAM8P31997 349 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 SLC1A2P43004 574 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 HNRNPFP52597 415 aaKnown RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 HK2P52789 917 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 HSD17B7P56937 341 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 CDK16Q00536 496 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 TIAL1Q01085 375 aaKnown RBP eCLIP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 DHX9Q08211 1270 aaKnown RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 SP140Q13342 867 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 DHX34Q14147 1143 aaKnown RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 TPSAB1Q15661 275 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 ARMC3Q5W041 872 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 LRRC8EQ6NSJ5 796 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 C4orf22Q6V702 233 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 RAD9BQ6WBX8 426 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 HSDL2Q6YN16 418 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 CXorf67Q86X51 503 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 ULK2Q8IYT8 1036 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 LRRN4CLQ8ND94 238 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 TMEM52Q8NDY8 209 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 TNIP2Q8NFZ5 429 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 EEF1AKMT1Q8WVE0 214 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 SREK1Q8WXA9 508 aaKnown RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 NEIL2Q969S2 332 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 DOCK7Q96N67 2140 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 TSGA10Q9BZW7 698 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 EXO5Q9H790 373 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 ADAP2Q9NPF8 381 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 SACM1LQ9NTJ5 587 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 MTRF1LQ9UGC7 380 aaKnown RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 FOXD3Q9UJU5 478 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-213ENST00000476777 ATG4BQ9Y4P1 393 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 PCDHGB3Q9Y5G1 929 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 COMMD10Q9Y6G5 202 aa10.5□□□□□ -0.73
BRCA1-213ENST00000476777 ABCA1O95477 2261 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 ZCWPW2A0A1B0GU75 182 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 A0A1W2PPR1 153 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 CLCA1A8K7I4 914 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 KDM4EB2RXH2 506 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-213ENST00000476777 SERPINA6P08185 405 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 BTN3A2P78410 334 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 REEP5Q00765 189 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 THOC5Q13769 683 aaKnown RBP10.49□□□□□ -0.73
BRCA1-213ENST00000476777 BMPR2Q13873 1038 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 RUNX2Q13950 521 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 CSHL1Q14406 222 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 SIX1Q15475 284 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-213ENST00000476777 KCTD19Q17RG1 926 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-213ENST00000476777 BBS9Q3SYG4 887 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 SEL1L2Q5TEA6 688 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 DUPD1Q68J44 220 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 CASC4Q6P4E1 433 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 PALM2Q8IXS6 379 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 CIARTQ8N365 385 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-213ENST00000476777 FBXW8Q8N3Y1 598 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 TRPV3Q8NET8 790 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms