RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 MAGEB10Q96LZ2 347 aaPredicted RBP16.98■□□□□ 0.31
CCM2-207ENST00000475551 HYLS1Q96M11 299 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 NECTIN4Q96NY8 510 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 TCF25Q9BQ70 676 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 ANKRA2Q9H9E1 313 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 ZNF282Q9UDV7 671 aaPredicted RBP16.98■□□□□ 0.31
CCM2-207ENST00000475551 NDOR1Q9UHB4 597 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 PCDHB9Q9Y5E1 797 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 ALPK3Q96L96 1907 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 DSPPQ9NZW4 1301 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 TLR4O00206 839 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 MYL12BO14950 172 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 AP2A2O94973 939 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 GADD45GO95257 159 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 IFI30P13284 250 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 MYL12AP19105 171 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 AOAHP28039 575 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 C1DQ13901 141 aaKnown RBP16.97■□□□□ 0.31
CCM2-207ENST00000475551 CPTPQ5TA50 214 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 CAMKMTQ7Z624 323 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 IL17RCQ8NAC3 791 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 ATP6V1C2Q8NEY4 427 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 DNAJA4Q8WW22 397 aaPredicted RBP16.97■□□□□ 0.31
CCM2-207ENST00000475551 IL4I1Q96RQ9 567 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 PAK6Q9NQU5 681 aaPredicted RBP16.97■□□□□ 0.31
CCM2-207ENST00000475551 KCTD5Q9NXV2 234 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 SLC23A1Q9UHI7 598 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 RPL36Q9Y3U8 105 aaKnown RBP16.97■□□□□ 0.31
CCM2-207ENST00000475551 PCDHGB7Q9Y5F8 929 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 SNX11Q9Y5W9 270 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 LINC00862A6NCI5 91 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 GABRR3A8MPY1 467 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 PRAMEF4O60810 478 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 SLC43A1O75387 559 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 OAZ2O95190 189 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 RHOCP08134 193 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 CLEC2LP0C7M8 214 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 PRKAR1AP10644 381 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 MAN2A2P49641 1150 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 CPT1AP50416 773 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 RBBP4Q09028 425 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 PRAMEF9Q5VWM5 478 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 LIPKQ5VXJ0 399 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 ZNF782Q6ZMW2 699 aaPredicted RBP16.97■□□□□ 0.31
CCM2-207ENST00000475551 RNF175Q8N4F7 328 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 PIH1D2Q8WWB5 315 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 AP3S1Q92572 193 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 AP2M1Q96CW1 435 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 SOSTQ9BQB4 213 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 MARVELD1Q9BSK0 173 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 VPS29Q9UBQ0 182 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 TMCC3Q9ULS5 477 aa16.97■□□□□ 0.31
CCM2-207ENST00000475551 CLDN11O75508 207 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 TNFRSF21O75509 655 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 GSTM1P09488 218 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 SLC2A2P11168 524 aaPredicted RBP16.96■□□□□ 0.31
CCM2-207ENST00000475551 CYBAP13498 195 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 JUPP14923 745 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 SSTR4P31391 388 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 MVDP53602 400 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 MAPK12P53778 367 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 RPS24P62847 133 aaKnown RBP16.96■□□□□ 0.31
CCM2-207ENST00000475551 TRIQKQ629K1 86 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 CDC26Q8NHZ8 85 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 ZBED6CLQ96FA7 236 aaPredicted RBP16.96■□□□□ 0.31
CCM2-207ENST00000475551 NMNAT1Q9HAN9 279 aaPredicted RBP16.96■□□□□ 0.31
CCM2-207ENST00000475551 GLTPQ9NZD2 209 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 AUP1Q9Y679 476 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 WASHC1A8K0Z3 465 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 PDPK1O15530 556 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 ALPIP09923 528 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 PRKAR2AP13861 404 aaKnown RBP16.96■□□□□ 0.31
CCM2-207ENST00000475551 POU1F1P28069 291 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 CRATP43155 626 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 TUFMP49411 452 aaKnown RBP16.96■□□□□ 0.31
CCM2-207ENST00000475551 HNMTP50135 292 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 SCARB2Q14108 478 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 ZBTB37Q5TC79 503 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 ZNF770Q6IQ21 691 aaPredicted RBP16.96■□□□□ 0.31
CCM2-207ENST00000475551 FBXL6Q8N531 539 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 OMA1Q96E52 524 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 QRFPRQ96P65 431 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 DCLRE1CQ96SD1 692 aaKnown RBP16.96■□□□□ 0.31
CCM2-207ENST00000475551 NELL2Q99435 816 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 C19orf43Q9BQ61 176 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 SLC12A9Q9BXP2 914 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 CRISPLD1Q9H336 500 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 CCSER2Q9H7U1 834 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 GPATCH2Q9NW75 528 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 MCUBQ9NWR8 336 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 KLHL42Q9P2K6 505 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 ENPP4Q9Y6X5 453 aa16.96■□□□□ 0.31
CCM2-207ENST00000475551 TDRD15B5MCY1 1934 aaKnown RBP16.95■□□□□ 0.3
CCM2-207ENST00000475551 CD160O95971 181 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 CPEP16870 476 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 LBX1P52954 281 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 PPP3R1P63098 170 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 ARF5P84085 180 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 BEX3Q00994 111 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 TAGLNQ01995 201 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms