RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 EFCAB11Q9BUY7 163 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 MRPL46Q9H2W6 279 aaKnown RBP14.21□□□□□ -0.13
VARS-223ENST00000474643 MMP25Q9NPA2 562 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 ASB1Q9Y576 335 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 DOPEY1Q5JWR5 2465 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 UNC79Q9P2D8 2635 aa14.21□□□□□ -0.14
VARS-223ENST00000474643 CHST10O43529 356 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 STSP08842 583 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 RNH1P13489 461 aaKnown RBP14.2□□□□□ -0.14
VARS-223ENST00000474643 MTHFD2P13995 350 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 TAC1P20366 129 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 HPDP32754 393 aaPredicted RBP14.2□□□□□ -0.14
VARS-223ENST00000474643 STXBP1P61764 594 aaKnown RBP14.2□□□□□ -0.14
VARS-223ENST00000474643 SNRPNP63162 240 aaKnown RBP14.2□□□□□ -0.14
VARS-223ENST00000474643 PMP22Q01453 160 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 DOC2AQ14183 400 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 CASP8Q14790 479 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 OR1C1Q15619 314 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 TOR1AIP1Q5JTV8 583 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 MTFR2Q6P444 385 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 LCA5Q86VQ0 697 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 CRLF3Q8IUI8 442 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.2□□□□□ -0.14
VARS-223ENST00000474643 ANKRD53Q8N9V6 530 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 NT5CQ8TCD5 201 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 ACMSDQ8TDX5 336 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 TMEM125Q96AQ2 219 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 TAAR6Q96RI8 345 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 SARGQ9BW04 601 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 PITHD1Q9GZP4 211 aaPredicted RBP14.2□□□□□ -0.14
VARS-223ENST00000474643 EHD1Q9H4M9 534 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 RUBCNLQ9H714 662 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 COPG2Q9UBF2 871 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 LGALS13Q9UHV8 139 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 NOTCH2Q04721 2471 aa14.2□□□□□ -0.14
VARS-223ENST00000474643 GABRR3A8MPY1 467 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 PRSS44E7EML9 344 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 DYNC1I1O14576 645 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 ATP8B1O43520 1251 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 SIX3O95343 332 aaPredicted RBP14.19□□□□□ -0.14
VARS-223ENST00000474643 PCNAP12004 261 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 PIK3CGP48736 1102 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 EFNA3P52797 238 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 RHAGQ02094 409 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 TUBA3CQ13748 450 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 GTF2H2Q13888 395 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 ZRSR2Q15696 482 aaKnown RBP14.19□□□□□ -0.14
VARS-223ENST00000474643 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.19□□□□□ -0.14
VARS-223ENST00000474643 GTF2H2CQ6P1K8 395 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 TUBA3EQ6PEY2 450 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 PLPP5Q8NEB5 264 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 OR2W6PQ8NHA6 318 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 UTP15Q8TED0 518 aaKnown RBP14.19□□□□□ -0.14
VARS-223ENST00000474643 UBE2E3Q969T4 207 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 ACTR8Q9H981 624 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 COPS7BQ9H9Q2 264 aaPredicted RBP14.19□□□□□ -0.14
VARS-223ENST00000474643 SVILO95425 2214 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 TEX15Q9BXT5 2789 aa14.19□□□□□ -0.14
VARS-223ENST00000474643 A0A1W2PPM1 405 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 ARHGAP10A1A4S6 786 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 LRRC14BA6NHZ5 514 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 CCL21O00585 134 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 FCHO1O14526 889 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 KLK8O60259 260 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 B3GALT4O96024 378 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 SERPINA6P08185 405 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 GSTA1P08263 222 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 ESRRAP11474 423 aaPredicted RBP14.18□□□□□ -0.14
VARS-223ENST00000474643 GSTM2P28161 218 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 TDGF1P3P51864 188 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 SLC26A5P58743 744 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 ALDH6A1Q02252 535 aaKnown RBP14.18□□□□□ -0.14
VARS-223ENST00000474643 PCBP2Q15366 365 aaKnown RBP eCLIP14.18□□□□□ -0.14
VARS-223ENST00000474643 MAPKAPK3Q16644 382 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 MED27Q6P2C8 311 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 GOLGA7Q7Z5G4 137 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 SLC34A3Q8N130 599 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 AFAP1L2Q8N4X5 818 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 PGM2Q96G03 612 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 DEFB126Q9BYW3 111 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 CDCP1Q9H5V8 836 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 NT5DC2Q9H857 520 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 IPPKQ9H8X2 491 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 CLK4Q9HAZ1 481 aaKnown RBP14.18□□□□□ -0.14
VARS-223ENST00000474643 PRDM9Q9NQV7 894 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 LANCL2Q9NS86 450 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 TMEM216Q9P0N5 145 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 DCDC2Q9UHG0 476 aa14.18□□□□□ -0.14
VARS-223ENST00000474643 MRPS33Q9Y291 106 aaKnown RBP14.18□□□□□ -0.14
VARS-223ENST00000474643 CPAMD8Q8IZJ3 1885 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 A8MUA0 341 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 STX16-NPEPL1H3BU86 382 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 STX16O14662 325 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 GLRA3O75311 464 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 MAOAP21397 527 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 ST13P50502 369 aaKnown RBP14.17□□□□□ -0.14
VARS-223ENST00000474643 CCNG1P51959 295 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 BTN3A2P78410 334 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 PHEXP78562 749 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 SRSF11Q05519 484 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms