RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TMEM156Q8N614 296 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 FAM47BQ8NA70 645 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 C7orf57Q8NEG2 295 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 FBXO25Q8TCJ0 367 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 EXT2Q93063 718 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 MARVELD3Q96A59 401 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 ESAMQ96AP7 390 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 TSPAN10Q9H1Z9 355 aaPredicted RBP19■□□□□ 0.63
PDLIM4-206ENST00000474421 ALG9Q9H6U8 611 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 PRM3Q9NNZ6 103 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 DAPP1Q9UN19 280 aa19■□□□□ 0.63
PDLIM4-206ENST00000474421 KLRC4-KLRK1H3BQV0 150 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 PRAMEF4O60810 478 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 CTNSO60931 367 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 ZFAND5O76080 213 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 TBX6O95947 436 aaPredicted RBP18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 SLC35E2BP0CK96 405 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 TFEBP19484 476 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 AGAP20933 346 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 CERS1P27544 350 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 SERPINB1P30740 379 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 SMSP52788 366 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 CHIT1Q13231 466 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 NAA30Q147X3 362 aaPredicted RBP18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 ELAVL1Q15717 326 aaKnown RBP18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 C3AR1Q16581 482 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 TMEM35AQ53FP2 167 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 PRAMEF9Q5VWM5 478 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 ISCA2Q86U28 154 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 FBF1Q8TES7 1133 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 NCLNQ969V3 563 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 TBCDQ9BTW9 1192 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 LYRM4Q9HD34 91 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 CHST11Q9NPF2 352 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 CLCA3PQ9Y6N3 262 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 SPACA6W5XKT8 324 aa18.99■□□□□ 0.63
PDLIM4-206ENST00000474421 ARHGAP10A1A4S6 786 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 CCDC189A1A4V9 331 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 SYCE1LA8MT33 242 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 SUPT3HB4E1H0 165 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 CYR61O00622 381 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 KERAO60938 352 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 SUPT3HO75486 399 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 ITGA10O75578 1167 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 WISP2O76076 250 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 LTA4HP09960 611 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 CD22P20273 847 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 MSH2P43246 934 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 E2F2Q14209 437 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 BNC2Q6ZN30 1099 aaPredicted RBP18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 ZNF227Q86WZ6 799 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 EID3Q8N140 333 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 CYP4Z2PQ8N1L4 340 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 CPSF7Q8N684 471 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 UBTD2Q8WUN7 234 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 DAZLQ92904 295 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 F2RL3Q96RI0 385 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 PRDM7Q9NQW5 492 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 TINAGQ9UJW2 476 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 YARS2Q9Y2Z4 477 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 CLDN16Q9Y5I7 305 aa18.98■□□□□ 0.63
PDLIM4-206ENST00000474421 K7EPI3 171 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 FAM155BO75949 473 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 IFNA16P05015 189 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 ABOP16442 354 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 EPORP19235 508 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 SSR4P51571 173 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 GPR143P51810 404 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 HNRNPFP52597 415 aaKnown RBP18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 PCDH1Q08174 1060 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 STX4Q12846 297 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 BMPR2Q13873 1038 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 SERTAD2Q14140 314 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 ADNP2Q6IQ32 1131 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 MED27Q6P2C8 311 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 ZDHHC24Q6UX98 284 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 SYT10Q6XYQ8 523 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 CHSY3Q70JA7 882 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 ZNF572Q7Z3I7 529 aaPredicted RBP18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 CLNKQ7Z7G1 428 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 CMC1Q7Z7K0 106 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 GPALPP1Q8IXQ4 340 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 TMEM52Q8NDY8 209 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 OR14A16Q8NHC5 309 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 ZNF473Q8WTR7 871 aaKnown RBP18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 ATOH8Q96SQ7 321 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 MS4A8Q9BY19 250 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 TIMMDC1Q9NPL8 285 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 OPTCQ9UBM4 332 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 VTI1BQ9UEU0 232 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 ADGRE2Q9UHX3 823 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 ACOT9Q9Y305 439 aa18.97■□□□□ 0.63
PDLIM4-206ENST00000474421 NCOA6Q14686 2063 aaPredicted RBP18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 ENO4A6NNW6 628 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 TGFBR3LH3BV60 316 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 HTR1EP28566 365 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 PPP2R1BP30154 601 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 MEOX1P50221 254 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 CKAP4Q07065 602 aaKnown RBP18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 FAM83EQ2M2I3 478 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms