RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TAAR6Q96RI8 345 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 NPAS2Q99743 824 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 RHOXF2Q9BQY4 288 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 UTP23Q9BRU9 249 aaKnown RBP10.47□□□□□ -0.73
CKS1B-206ENST00000474215 CDCP1Q9H5V8 836 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 ACTR8Q9H981 624 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 LYRM4Q9HD34 91 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 PRTFDC1Q9NRG1 225 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 OLAHQ9NV23 265 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 TMCO1Q9UM00 188 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 TSC22D4Q9Y3Q8 395 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 PCDHGA11Q9Y5H2 935 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 SHANK1Q9Y566 2161 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 EXOC1LA0A1B0GW35 172 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 H0YIV9 168 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 SAP18O00422 153 aaKnown RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 RTCAO00442 366 aaKnown RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 E2F3O00716 465 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 CDK2AP1O14519 115 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 MAN1A2O60476 641 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 UGDHO60701 494 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 SH3BGRLO75368 114 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 MYO1DO94832 1006 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 RASAL1O95294 804 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 SIX3O95343 332 aaPredicted RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 ABHD2P08910 425 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 SNRPAP09012 282 aaKnown RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 HIST1H1TP22492 207 aaPredicted RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 PTX3P26022 381 aaPredicted RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 HNRNPFP52597 415 aaKnown RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 DDX39BQ13838 428 aaKnown RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 TERF2Q15554 542 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 ZNF324BQ6AW86 544 aaPredicted RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 OR4C11Q6IEV9 310 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 ZNF793Q6ZN11 406 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 PTGR2Q8N8N7 351 aaPredicted RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 L3MBTL4Q8NA19 623 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 MDS2Q8NDY4 140 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 B3GNT7Q8NFL0 401 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 DNAJB8Q8NHS0 232 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 SSC4DQ8WTU2 575 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 RGMAQ96B86 450 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 REPS1Q96D71 796 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 PHF21BQ96EK2 531 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 MTERF1Q99551 399 aaKnown RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 MAPKAP1Q9BPZ7 522 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 SLX1AQ9BQ83 275 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 DEFB126Q9BYW3 111 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 OR51B5Q9H339 312 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 PNO1Q9NRX1 252 aaKnown RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 ANKRD10Q9NXR5 420 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 PPIEQ9UNP9 301 aaKnown RBP10.46□□□□□ -0.73
CKS1B-206ENST00000474215 PCDHGB6Q9Y5F9 930 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 CLDN16Q9Y5I7 305 aa10.46□□□□□ -0.73
CKS1B-206ENST00000474215 RP1L1Q8IWN7 2480 aaPredicted RBP10.46□□□□□ -0.74
CKS1B-206ENST00000474215 USP9XQ93008 2570 aaPredicted RBP10.46□□□□□ -0.74
CKS1B-206ENST00000474215 BLACEA4D250 179 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 SYNDIG1LA6NDD5 238 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 GABRR3A8MPY1 467 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 STX16-NPEPL1H3BU86 382 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 TGFBR3LH3BV60 316 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 STX16O14662 325 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 RIPK2O43353 540 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 SMIM24O75264 130 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 SCELO95171 688 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 CLDN9O95484 217 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 DDAH2O95865 285 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 CRYABP02511 175 aaKnown RBP10.45□□□□□ -0.74
CKS1B-206ENST00000474215 FAM153BP0C7A2 387 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 GCAP28676 217 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 EEF1DP29692 281 aaKnown RBP10.45□□□□□ -0.74
CKS1B-206ENST00000474215 PPP2R1BP30154 601 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 SSR2P43308 183 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 ST13P50502 369 aaKnown RBP10.45□□□□□ -0.74
CKS1B-206ENST00000474215 RAP1GDS1P52306 607 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 ARFIP1P53367 373 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 MLF1P58340 268 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 OC90Q02509 493 aaPredicted RBP10.45□□□□□ -0.74
CKS1B-206ENST00000474215 SLAMF1Q13291 335 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 OR1C1Q15619 314 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 CPSF6Q16630 551 aaKnown RBP eCLIP10.45□□□□□ -0.74
CKS1B-206ENST00000474215 FAM153CQ494X1 144 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 ZNF766Q5HY98 468 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 SPINK14Q6IE38 97 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 ADGRD1Q6QNK2 874 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 TIFABQ6ZNK6 161 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 CLNKQ7Z7G1 428 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 ARMC10Q8N2F6 343 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 RNF175Q8N4F7 328 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 HORMAD2Q8N7B1 307 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 APCDD1LQ8NCL9 501 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 NR4A3Q92570 626 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 ATP6V1E2Q96A05 226 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 MTBPQ96DY7 904 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 SIGLEC12Q96PQ1 595 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 CSF3RQ99062 836 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 MRPL57Q9BQC6 102 aaKnown RBP10.45□□□□□ -0.74
CKS1B-206ENST00000474215 CENPKQ9BS16 269 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 ALOXE3Q9BYJ1 711 aa10.45□□□□□ -0.74
CKS1B-206ENST00000474215 MRPL46Q9H2W6 279 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms