RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 CAB39LQ9H9S4 337 aa23.06■■□□□ 1.28
PKD1-211ENST00000474088 LIN28AQ9H9Z2 209 aaKnown RBP23.06■■□□□ 1.28
PKD1-211ENST00000474088 WWOXQ9NZC7 414 aa23.06■■□□□ 1.28
PKD1-211ENST00000474088 ERVK-11Q9UQG0 969 aa23.06■■□□□ 1.28
PKD1-211ENST00000474088 PCNX1Q96RV3 2341 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 SYNDIG1LA6NDD5 238 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 CCDC188H7C350 402 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 CTNSO60931 367 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 OR2J2O76002 312 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 TUBB4AP04350 444 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 CERS1P27544 350 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 BMPR2Q13873 1038 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 ELAVL1Q15717 326 aaKnown RBP23.05■■□□□ 1.28
PKD1-211ENST00000474088 XKR6Q5GH73 641 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 CDKL4Q5MAI5 379 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 TMEM211Q6ICI0 200 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 GPSM1Q86YR5 675 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 GPALPP1Q8IXQ4 340 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 PSD4Q8NDX1 1056 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 PTCD3Q96EY7 689 aaKnown RBP23.05■■□□□ 1.28
PKD1-211ENST00000474088 CSF3RQ99062 836 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 KCNF1Q9H3M0 494 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 PRDM7Q9NQW5 492 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 DEPPQ9NTK1 212 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 MYOTQ9UBF9 498 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 ITGB1BP2Q9UKP3 347 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 SNX24Q9Y343 169 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 SAR1BQ9Y6B6 198 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 CLCA3PQ9Y6N3 262 aa23.05■■□□□ 1.28
PKD1-211ENST00000474088 A8MVJ9 347 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 PDE9AO76083 593 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 IFNA16P05015 189 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 CCDC166P0CW27 439 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 RPL21P46778 160 aaKnown RBP23.04■■□□□ 1.28
PKD1-211ENST00000474088 HSPA7P48741 367 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 KRTAP10-9P60411 292 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 DOC2AQ14183 400 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 RCN2Q14257 317 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 FBXO48Q5FWF7 155 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 SULT1C3Q6IMI6 304 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 ADNP2Q6IQ32 1131 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 ARHGAP11AQ6P4F7 1023 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 CAPN12Q6ZSI9 719 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 CEP128Q6ZU80 1094 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 MARVELD2Q8N4S9 558 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 ASB15Q8WXK1 588 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 WDR34Q96EX3 536 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 TSPAN17Q96FV3 270 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 DEFB127Q9H1M4 99 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 COPS7BQ9H9Q2 264 aaPredicted RBP23.04■■□□□ 1.28
PKD1-211ENST00000474088 HPF1Q9NWY4 346 aa23.04■■□□□ 1.28
PKD1-211ENST00000474088 PKDREJQ9NTG1 2253 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 MYOCOSA0A1B0GUC4 107 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 STK16O75716 305 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 CAPN3P20807 821 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 EFTUD2Q15029 972 aaKnown RBP eCLIP23.03■■□□□ 1.28
PKD1-211ENST00000474088 IL20RBQ6UXL0 311 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 HSDL2Q6YN16 418 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 MEX3BQ6ZN04 569 aaKnown RBP23.03■■□□□ 1.28
PKD1-211ENST00000474088 SNX31Q8N9S9 440 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 MORN4Q8NDC4 146 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 PYROXD1Q8WU10 500 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 PTPMT1Q8WUK0 201 aaPredicted RBP23.03■■□□□ 1.28
PKD1-211ENST00000474088 CHTF18Q8WVB6 975 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 DAZLQ92904 295 aaKnown RBP23.03■■□□□ 1.28
PKD1-211ENST00000474088 F2RL3Q96RI0 385 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 TREX2Q9BQ50 279 aaPredicted RBP23.03■■□□□ 1.28
PKD1-211ENST00000474088 ALOXE3Q9BYJ1 711 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 TP63Q9H3D4 680 aaPredicted RBP23.03■■□□□ 1.28
PKD1-211ENST00000474088 VTI1BQ9UEU0 232 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 OTOGQ6ZRI0 2925 aa23.03■■□□□ 1.28
PKD1-211ENST00000474088 USP27XA6NNY8 438 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 CXorf49A8MYA2 514 aaPredicted RBP23.02■■□□□ 1.28
PKD1-211ENST00000474088 WWP2O00308 870 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 PHGDHO43175 533 aaKnown RBP23.02■■□□□ 1.28
PKD1-211ENST00000474088 OR6B1O95007 311 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 CD1DP15813 335 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 CD22P20273 847 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 SSTR1P30872 391 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 PAFAH1B1P43034 410 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 NR0B1P51843 470 aaKnown RBP23.02■■□□□ 1.28
PKD1-211ENST00000474088 GNG11P61952 73 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 TGM3Q08188 693 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 OR4D1Q15615 310 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 PDK4Q16654 411 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 PAOXQ6QHF9 649 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 OR2M7Q8NG81 312 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 ASB5Q8WWX0 329 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 RASL10BQ96S79 203 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 EFCAB11Q9BUY7 163 aa23.02■■□□□ 1.28
PKD1-211ENST00000474088 PTBP2Q9UKA9 531 aaKnown RBP23.02■■□□□ 1.28
PKD1-211ENST00000474088 PINLYPA6NC86 204 aa23.01■■□□□ 1.27
PKD1-211ENST00000474088 SOX3P41225 446 aa23.01■■□□□ 1.27
PKD1-211ENST00000474088 KCNC1P48547 511 aa23.01■■□□□ 1.27
PKD1-211ENST00000474088 ATP6V0D1P61421 351 aa23.01■■□□□ 1.27
PKD1-211ENST00000474088 PPIAP62937 165 aaKnown RBP23.01■■□□□ 1.27
PKD1-211ENST00000474088 PLGLB1Q02325 96 aa23.01■■□□□ 1.27
PKD1-211ENST00000474088 TLE4Q04727 773 aa23.01■■□□□ 1.27
PKD1-211ENST00000474088 STX4Q12846 297 aa23.01■■□□□ 1.27
PKD1-211ENST00000474088 LAPTM5Q13571 262 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms