RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DAPP1Q9UN19 280 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 SLC12A4Q9UP95 1085 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 TP53TG5Q9Y2B4 290 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 LOC102723996A0A087X1L8 192 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 BLACEA4D250 179 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 OR2W5A6NFC9 320 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 FAM227AF5H4B4 570 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 ULK1O75385 1050 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 ESRRBO95718 433 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 COX6A1P12074 109 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 CPN2P22792 545 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 RHAGQ02094 409 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 C19orf57Q0VDD7 668 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 RAPSNQ13702 412 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 MYBPC3Q14896 1274 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
USF1-205ENST00000473969 VWA5B1Q5TIE3 1220 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 AGAP7PQ5VUJ5 663 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 LANCL3Q6ZV70 420 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 UBE3DQ7Z6J8 389 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 ANKRD37Q7Z713 158 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 NUDT13Q86X67 352 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 HPS6Q86YV9 775 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 C10orf107Q8IVU9 208 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 FAM47BQ8NA70 645 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 TEX19Q8NA77 164 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 FDCSPQ8NFU4 85 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 PPP1R14CQ8TAE6 165 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 TM9SF4Q92544 642 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 THOC3Q96J01 351 aaKnown RBP12.94□□□□□ -0.34
USF1-205ENST00000473969 AGAP4Q96P64 663 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 LPAR4Q99677 370 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 SEMA4CQ9C0C4 833 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 GSTO2Q9H4Y5 243 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 BRF2Q9HAW0 419 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 KCNK9Q9NPC2 374 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 PHF11Q9UIL8 331 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 SCN3AQ9NY46 2000 aa12.94□□□□□ -0.34
USF1-205ENST00000473969 MANBAO00462 879 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 PLPP1O14494 284 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 CEACAM4O75871 244 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 SEC24DO94855 1032 aaPredicted RBP12.93□□□□□ -0.34
USF1-205ENST00000473969 SEMA3DO95025 777 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 PDYNP01213 254 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 PRB1P04280 392 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 SERPINA7P05543 415 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 HSD3B1P14060 373 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 HSD3B2P26439 372 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 BUD31P41223 144 aaPredicted RBP12.93□□□□□ -0.34
USF1-205ENST00000473969 HSD17B7P56937 341 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 SOX8P57073 446 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 BTG2P78543 158 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 ZNF33BQ06732 778 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 STX4Q12846 297 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 EXT1Q16394 746 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 SFT2D3Q587I9 215 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 ZNF793Q6ZN11 406 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 RIPOR1Q6ZS17 1223 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 FRMD7Q6ZUT3 714 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 GPR180Q86V85 440 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 ZCCHC7Q8N3Z6 543 aaKnown RBP12.93□□□□□ -0.34
USF1-205ENST00000473969 GBP7Q8N8V2 638 aaPredicted RBP12.93□□□□□ -0.34
USF1-205ENST00000473969 TSLPQ969D9 159 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 PGM2Q96G03 612 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 CNDP1Q96KN2 507 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 TRMOQ9BU70 441 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 WDR41Q9HAD4 459 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 EML4Q9HC35 981 aaKnown RBP12.93□□□□□ -0.34
USF1-205ENST00000473969 SSU72Q9NP77 194 aaKnown RBP12.93□□□□□ -0.34
USF1-205ENST00000473969 RRAGDQ9NQL2 400 aaPredicted RBP12.93□□□□□ -0.34
USF1-205ENST00000473969 LYARQ9NX58 379 aaKnown RBP12.93□□□□□ -0.34
USF1-205ENST00000473969 C5AR2Q9P296 337 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 SLC17A7Q9P2U7 560 aa12.93□□□□□ -0.34
USF1-205ENST00000473969 IGHV3-20A0A0C4DH32 117 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 A0A1B0GTL3 188 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 A0A1W2PQ72 361 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 MASP2O00187 686 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 DPM1O60762 260 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 CTNSO60931 367 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 GUCY1B2O75343 617 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 SCELO95171 688 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 CHEK2O96017 543 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 NEFHP12036 1026 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 MAOAP21397 527 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 PPP2R1BP30154 601 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 ALDH3A1P30838 453 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 CSTF3Q12996 717 aaKnown RBP12.92□□□□□ -0.34
USF1-205ENST00000473969 PCLAFQ15004 111 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 PCOLCEQ15113 449 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 IMPG1Q17R60 797 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 BTBD16Q32M84 506 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 JMJD6Q6NYC1 403 aaPredicted RBP12.92□□□□□ -0.34
USF1-205ENST00000473969 PAPD4Q6PIY7 484 aaKnown RBP12.92□□□□□ -0.34
USF1-205ENST00000473969 EXOC3L1Q86VI1 746 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 PTRH1Q86Y79 214 aaKnown RBP12.92□□□□□ -0.34
USF1-205ENST00000473969 AGAP11Q8TF27 550 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 ZBTB9Q96C00 473 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 SMAD5Q99717 465 aaKnown RBP12.92□□□□□ -0.34
USF1-205ENST00000473969 MAPKAP1Q9BPZ7 522 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms