RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 THAP3Q8WTV1 239 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-222ENST00000473373 DCAKDQ8WVC6 231 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 PSMF1Q92530 271 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 HAS2Q92819 552 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 RGMAQ96B86 450 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 MTFMTQ96DP5 389 aaKnown RBP10.81□□□□□ -0.68
CPNE1-222ENST00000473373 MTBPQ96DY7 904 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 WDR34Q96EX3 536 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 TBCDQ9BTW9 1192 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 MS4A8Q9BY19 250 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 OR51B5Q9H339 312 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 MMP25Q9NPA2 562 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 NECTIN3Q9NQS3 549 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 KLHL1Q9NR64 748 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 OLAHQ9NV23 265 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 PLEKHB1Q9UF11 243 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-222ENST00000473373 TBK1Q9UHD2 729 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 ZNF180Q9UJW8 692 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 ZNF490Q9ULM2 529 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-222ENST00000473373 CLCA3PQ9Y6N3 262 aa10.81□□□□□ -0.68
CPNE1-222ENST00000473373 MYOCOSA0A1B0GUC4 107 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 ARHGAP10A1A4S6 786 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 HMX2A2RU54 273 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 SYNDIG1LA6NDD5 238 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 LRRC14BA6NHZ5 514 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 SMIM23A6NLE4 172 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 GABRR3A8MPY1 467 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 RIPK2O43353 540 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 DYRK3O43781 588 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 CLDN9O95484 217 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 ABHD2P08910 425 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 SMIM10L1P0DMW3 83 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 COX7A2P14406 83 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 CD46P15529 392 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 ECHS1P30084 290 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 TNFSF10P50591 281 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 CLCN2P51788 898 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 LIM2P55344 173 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 HSD17B7P56937 341 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 RPS13P62277 151 aaKnown RBP10.8□□□□□ -0.68
CPNE1-222ENST00000473373 IFT88Q13099 833 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 PCBP2Q15366 365 aaKnown RBP eCLIP10.8□□□□□ -0.684e-26■■□□□ 14.3
CPNE1-222ENST00000473373 ZNF766Q5HY98 468 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 KHDRBS2Q5VWX1 349 aaKnown RBP10.8□□□□□ -0.68
CPNE1-222ENST00000473373 RPS19BP1Q86WX3 136 aaKnown RBP10.8□□□□□ -0.68
CPNE1-222ENST00000473373 KIF2BQ8N4N8 673 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 ACOT4Q8N9L9 421 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 HUS1BQ8NHY5 278 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 ZNF473Q8WTR7 871 aaKnown RBP10.8□□□□□ -0.68
CPNE1-222ENST00000473373 TMEM125Q96AQ2 219 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 SMIM10Q96HG1 83 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 MRPL57Q9BQC6 102 aaKnown RBP10.8□□□□□ -0.68
CPNE1-222ENST00000473373 FUT8Q9BYC5 575 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 AICDAQ9GZX7 198 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 MRPL46Q9H2W6 279 aaKnown RBP10.8□□□□□ -0.68
CPNE1-222ENST00000473373 NOL11Q9H8H0 719 aaKnown RBP10.8□□□□□ -0.68
CPNE1-222ENST00000473373 WDR41Q9HAD4 459 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 SEMA4BQ9NPR2 832 aaPredicted RBP10.8□□□□□ -0.68
CPNE1-222ENST00000473373 PSMC3IPQ9P2W1 217 aaPredicted RBP10.8□□□□□ -0.68
CPNE1-222ENST00000473373 COPG2Q9UBF2 871 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 DAPP1Q9UN19 280 aa10.8□□□□□ -0.68
CPNE1-222ENST00000473373 DIDO1Q9BTC0 2240 aaKnown RBP10.79□□□□□ -0.68
CPNE1-222ENST00000473373 TCRBV16S1A1N1A0A5B0 115 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 GOLGA8RI6L899 631 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 UGDHO60701 494 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 PRAMEF4O60810 478 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 PRAMEF2O60811 474 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 LDB3O75112 727 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 MLYCDO95822 493 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 CRYABP02511 175 aaKnown RBP10.79□□□□□ -0.68
CPNE1-222ENST00000473373 MTHFD2P13995 350 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 KRT15P19012 456 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 EPORP19235 508 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 ATP5A1P25705 553 aaKnown RBP10.79□□□□□ -0.68
CPNE1-222ENST00000473373 PTX3P26022 381 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-222ENST00000473373 BUD31P41223 144 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-222ENST00000473373 CASP2P42575 452 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 SLAMF1Q13291 335 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 SLC29A2Q14542 456 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 OR1C1Q15619 314 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 ZRSR2Q15696 482 aaKnown RBP10.79□□□□□ -0.68
CPNE1-222ENST00000473373 INAQ16352 499 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 MAPKAPK3Q16644 382 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 ADPRMQ3LIE5 342 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 SGO1Q5FBB7 561 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 PRAMEF9Q5VWM5 478 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 OR4C11Q6IEV9 310 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 VN1R5Q7Z5H4 357 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 MILR1Q7Z6M3 343 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 LAS2Q8IYD9 372 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 TMEM132CQ8N3T6 1108 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 RNF175Q8N4F7 328 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 TMEM156Q8N614 296 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 AMER2Q8N7J2 671 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 CCDC63Q8NA47 563 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 TMEM178AQ8NBL3 297 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 B3GNT7Q8NFL0 401 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 FAR1Q8WVX9 515 aa10.79□□□□□ -0.68
CPNE1-222ENST00000473373 SREK1Q8WXA9 508 aaKnown RBP10.79□□□□□ -0.68
CPNE1-222ENST00000473373 DAZLQ92904 295 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms