RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ADAM10O14672 748 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 EIF3HO15372 352 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL7A1-208ENST00000470076 PIAS1O75925 651 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 CD1DP15813 335 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 STMN1P16949 149 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 PPP2R1BP30154 601 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 SSTR1P30872 391 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 PTGS2P35354 604 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 HSPA7P48741 367 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 LIM2P55344 173 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 CALCOCO2Q13137 446 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 EFTUD2Q15029 972 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL7A1-208ENST00000470076 PDK4Q16654 411 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 XKR6Q5GH73 641 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 PAGE2BQ5JRK9 111 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 NCCRP1Q6ZVX7 275 aaPredicted RBP16.28■□□□□ 0.2
COL7A1-208ENST00000470076 CYS1Q717R9 158 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 MDGA2Q7Z553 956 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 VN1R5Q7Z5H4 357 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 GPALPP1Q8IXQ4 340 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 SPATA6LQ8N4H0 392 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 SNX31Q8N9S9 440 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 FAM57AQ8TBR7 257 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 LURAP1Q96LR2 239 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 GPR22Q99680 433 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 RBBP8Q99708 897 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 CPNE1Q99829 537 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 ZNF490Q9ULM2 529 aaPredicted RBP16.28■□□□□ 0.2
COL7A1-208ENST00000470076 PPT2Q9UMR5 302 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 ERVK-11Q9UQG0 969 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 CLCA3PQ9Y6N3 262 aa16.28■□□□□ 0.2
COL7A1-208ENST00000470076 A0A1B0GTH9 108 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 C19orf84I3L1E1 186 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 PHGDHO43175 533 aaKnown RBP16.27■□□□□ 0.2
COL7A1-208ENST00000470076 HS6ST1O60243 411 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 PRAMEF4O60810 478 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 CTNSO60931 367 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 TUBB4AP04350 444 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 CERS1P27544 350 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 SSTR2P30874 369 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 RFC3P40938 356 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 KCNC1P48547 511 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 LAPTM5Q13571 262 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 BMPR2Q13873 1038 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 DOC2AQ14183 400 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 CMPK2Q5EBM0 449 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 PRAMEF9Q5VWM5 478 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 C3P1Q6ZMU1 363 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 PDPRQ8NCN5 879 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 SRFBP1Q8NEF9 429 aaKnown RBP16.27■□□□□ 0.2
COL7A1-208ENST00000470076 DAZLQ92904 295 aaKnown RBP16.27■□□□□ 0.2
COL7A1-208ENST00000470076 KIAA1191Q96A73 305 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 KCNC2Q96PR1 638 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 ROGDIQ9GZN7 287 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 SAYSD1Q9NPB0 183 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 COQ3Q9NZJ6 369 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 CD274Q9NZQ7 290 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 WHRNQ9P202 907 aa16.27■□□□□ 0.2
COL7A1-208ENST00000470076 ZNF407Q9C0G0 2248 aa16.27■□□□□ 0.19
COL7A1-208ENST00000470076 TCRBV9S1A1TA0A576 114 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 A8MVJ9 347 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 CXorf49A8MYA2 514 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-208ENST00000470076 PRKNO60260 465 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-208ENST00000470076 IFNA16P05015 189 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 TPOP07202 933 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 GP5P40197 560 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 KIR3DL1P43629 444 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 GPR85P60893 370 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 STX4Q12846 297 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 OR4D1Q15615 310 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 ZKSCAN8Q15776 578 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-208ENST00000470076 TBCCQ15814 346 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 HIST2H2ACQ16777 129 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-208ENST00000470076 FBXO48Q5FWF7 155 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 HIST2H2AA3Q6FI13 130 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 ADNP2Q6IQ32 1131 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 ARHGAP11AQ6P4F7 1023 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 HSDL2Q6YN16 418 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 CLNKQ7Z7G1 428 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 ZNF295-AS1Q8N0V1 137 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 MORN4Q8NDC4 146 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 PSD4Q8NDX1 1056 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 OR14A16Q8NHC5 309 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 CA5BP1Q8WTZ4 195 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 ASB15Q8WXK1 588 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 ESAMQ96AP7 390 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 SDCCAG3Q96C92 435 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 UBXN10Q96LJ8 280 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 F2RL3Q96RI0 385 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 CSF3RQ99062 836 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 SPOCK3Q9BQ16 436 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 ERP44Q9BS26 406 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 LYRM4Q9HD34 91 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 PRDM7Q9NQW5 492 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 PLSCR2Q9NRY7 297 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 HPF1Q9NWY4 346 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 KCMF1Q9P0J7 381 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 MYOTQ9UBF9 498 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 VTI1BQ9UEU0 232 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 PTBP2Q9UKA9 531 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms