RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SLAMF1Q13291 335 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 KIAA0040Q15053 153 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 NR6A1Q15406 480 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 PDCD2Q16342 344 aaPredicted RBP15.1■□□□□ 0.01
GPC1-207ENST00000466624 TUBB8Q3ZCM7 444 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 SPDYAQ5MJ70 313 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 CYP20A1Q6UW02 462 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 TBC1D20Q96BZ9 403 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 PEX11GQ96HA9 241 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 SLC45A3Q96JT2 553 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 FCRL1Q96LA6 429 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 C3orf30Q96M34 536 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 YIPF2Q9BWQ6 316 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 LRTM1Q9HBL6 345 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 MRPS33Q9Y291 106 aaKnown RBP15.1■□□□□ 0.01
GPC1-207ENST00000466624 FREM2Q5SZK8 3169 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 SCN2AQ99250 2005 aa15.1■□□□□ 0.01
GPC1-207ENST00000466624 IGF2RP11717 2491 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 CHD8Q9HCK8 2581 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 PSMD12O00232 456 aaPredicted RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 PCDH17O14917 1159 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 KLK10O43240 276 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 TMPRSS11DO60235 418 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 EDF1O60869 148 aaKnown RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 DNAJB6O75190 326 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 GUCY1B2O75343 617 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 JUNP05412 331 aaKnown RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 KLK1P06870 262 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 FAM58BPP0C7Q3 252 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 ALOX15P16050 662 aaPredicted RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 FOLR3P41439 243 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 RAE1P78406 368 aaKnown RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 ATP6AP1LQ52LC2 224 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 CRTC2Q53ET0 693 aaPredicted RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 VWA2Q5GFL6 755 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 CCNYL2Q5T2Q4 361 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 GPR180Q86V85 440 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 WDR75Q8IWA0 830 aaKnown RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 SPACA3Q8IXA5 215 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 NACC2Q96BF6 587 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 NAF1Q96HR8 494 aaKnown RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 CCNL2Q96S94 520 aaPredicted RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 MAPKAP1Q9BPZ7 522 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 NUF2Q9BZD4 464 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 ACTL8Q9H568 366 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 PRDM9Q9NQV7 894 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 LANCL2Q9NS86 450 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 MARCOQ9UEW3 520 aaPredicted RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 ASB4Q9Y574 426 aa15.09■□□□□ 0.01
GPC1-207ENST00000466624 URB1O60287 2271 aaKnown RBP15.09■□□□□ 0.01
GPC1-207ENST00000466624 A0A087WV48 116 aa15.08■□□□□ 0
GPC1-207ENST00000466624 SYNDIG1LA6NDD5 238 aa15.08■□□□□ 0
GPC1-207ENST00000466624 TCP11X1B4DZS4 312 aa15.08■□□□□ 0
GPC1-207ENST00000466624 CYR61O00622 381 aa15.08■□□□□ 0
GPC1-207ENST00000466624 PCDH7O60245 1069 aa15.08■□□□□ 0
GPC1-207ENST00000466624 SEC22BO75396 215 aa15.08■□□□□ 0
GPC1-207ENST00000466624 MYO1DO94832 1006 aa15.08■□□□□ 0
GPC1-207ENST00000466624 TGDSO95455 350 aa15.08■□□□□ 0
GPC1-207ENST00000466624 IGHEP01854 428 aa15.08■□□□□ 0
GPC1-207ENST00000466624 PRR35P0CG20 571 aa15.08■□□□□ 0
GPC1-207ENST00000466624 KITP10721 976 aa15.08■□□□□ 0
GPC1-207ENST00000466624 BUD31P41223 144 aaPredicted RBP15.08■□□□□ 0
GPC1-207ENST00000466624 MAPK12P53778 367 aa15.08■□□□□ 0
GPC1-207ENST00000466624 HNRNPH2P55795 449 aaKnown RBP15.08■□□□□ 0
GPC1-207ENST00000466624 MC1RQ01726 317 aa15.08■□□□□ 0
GPC1-207ENST00000466624 TNFRSF17Q02223 184 aa15.08■□□□□ 0
GPC1-207ENST00000466624 KLC1Q07866 573 aa15.08■□□□□ 0
GPC1-207ENST00000466624 MAD2L1Q13257 205 aaPredicted RBP15.08■□□□□ 0
GPC1-207ENST00000466624 NOXRED1Q6NXP6 359 aa15.08■□□□□ 0
GPC1-207ENST00000466624 LRRC69Q6ZNQ3 347 aa15.08■□□□□ 0
GPC1-207ENST00000466624 QSOX2Q6ZRP7 698 aa15.08■□□□□ 0
GPC1-207ENST00000466624 FAM47EQ6ZV65 393 aa15.08■□□□□ 0
GPC1-207ENST00000466624 VASH2Q86V25 355 aa15.08■□□□□ 0
GPC1-207ENST00000466624 PARP9Q8IXQ6 854 aa15.08■□□□□ 0
GPC1-207ENST00000466624 ZNF595Q8IYB9 648 aa15.08■□□□□ 0
GPC1-207ENST00000466624 TUBGCP3Q96CW5 907 aa15.08■□□□□ 0
GPC1-207ENST00000466624 MAELQ96JY0 434 aaKnown RBP15.08■□□□□ 0
GPC1-207ENST00000466624 SEMA3GQ9NS98 782 aa15.08■□□□□ 0
GPC1-207ENST00000466624 IL17BQ9UHF5 180 aa15.08■□□□□ 0
GPC1-207ENST00000466624 FBXW2Q9UKT8 454 aa15.08■□□□□ 0
GPC1-207ENST00000466624 RAXQ9Y2V3 346 aa15.08■□□□□ 0
GPC1-207ENST00000466624 WBP11Q9Y2W2 641 aaKnown RBP15.08■□□□□ 0
GPC1-207ENST00000466624 PTRH2Q9Y3E5 179 aaKnown RBP15.08■□□□□ 0
GPC1-207ENST00000466624 MMACHCQ9Y4U1 282 aa15.08■□□□□ 0
GPC1-207ENST00000466624 USH1CQ9Y6N9 552 aa15.08■□□□□ 0
GPC1-207ENST00000466624 FRYQ5TBA9 3013 aa15.08■□□□□ 0
GPC1-207ENST00000466624 ATP6AP2A0A1C7CYW4 349 aa15.07■□□□□ 0
GPC1-207ENST00000466624 TAF4O00268 1085 aa15.07■□□□□ 0
GPC1-207ENST00000466624 ZNF195O14628 629 aa15.07■□□□□ 0
GPC1-207ENST00000466624 PROM1O43490 865 aa15.07■□□□□ 0
GPC1-207ENST00000466624 CREG1O75629 220 aa15.07■□□□□ 0
GPC1-207ENST00000466624 ATP6AP2O75787 350 aa15.07■□□□□ 0
GPC1-207ENST00000466624 GBAP04062 536 aa15.07■□□□□ 0
GPC1-207ENST00000466624 CPN2P22792 545 aa15.07■□□□□ 0
GPC1-207ENST00000466624 MAPK1P28482 360 aa15.07■□□□□ 0
GPC1-207ENST00000466624 TLX1P31314 330 aaPredicted RBP15.07■□□□□ 0
GPC1-207ENST00000466624 UCNP55089 124 aa15.07■□□□□ 0
GPC1-207ENST00000466624 HSD17B7P56937 341 aa15.07■□□□□ 0
GPC1-207ENST00000466624 RPL38P63173 70 aaKnown RBP15.07■□□□□ 0
GPC1-207ENST00000466624 ZNF763Q0D2J5 394 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms