RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 LIM2P55344 173 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 GPR85P60893 370 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 ATP6V0D1P61421 351 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 CALCOCO2Q13137 446 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 OR4D1Q15615 310 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 CDKL4Q5MAI5 379 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 PRAMEF9Q5VWM5 478 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 SULT1C3Q6IMI6 304 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 ABHD17CQ6PCB6 329 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 MDGA2Q7Z553 956 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 EID3Q8N140 333 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 PTCD3Q96EY7 689 aaKnown RBP17.84■□□□□ 0.45
COL9A3-206ENST00000466532 CSF3RQ99062 836 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 GPR22Q99680 433 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 CPNE1Q99829 537 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 VKORC1Q9BQB6 163 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 TRIM8Q9BZR9 551 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 DPH5Q9H2P9 285 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 CD274Q9NZQ7 290 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 RNF14Q9UBS8 474 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 ZNF490Q9ULM2 529 aaPredicted RBP17.84■□□□□ 0.45
COL9A3-206ENST00000466532 DAPP1Q9UN19 280 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 OTOGQ6ZRI0 2925 aa17.83■□□□□ 0.45
COL9A3-206ENST00000466532 A0A1B0GTH9 108 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 HS6ST1O60243 411 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 PRKNO60260 465 aaPredicted RBP17.83■□□□□ 0.44
COL9A3-206ENST00000466532 CDC40O60508 579 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL9A3-206ENST00000466532 IFNA16P05015 189 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 PTGS2P35354 604 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 BMPR2Q13873 1038 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 DOC2AQ14183 400 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 PDK4Q16654 411 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 C16orf47Q6ZP98 133 aaPredicted RBP17.83■□□□□ 0.44
COL9A3-206ENST00000466532 TMEM132CQ8N3T6 1108 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 C16orf52Q8NHV5 167 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 EXT2Q93063 718 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 WDR34Q96EX3 536 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 DMRTA2Q96SC8 542 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 EFCAB11Q9BUY7 163 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 LIN28AQ9H9Z2 209 aaKnown RBP17.83■□□□□ 0.44
COL9A3-206ENST00000466532 TIMMDC1Q9NPL8 285 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 KCMF1Q9P0J7 381 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 PPT2Q9UMR5 302 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 ERVK-11Q9UQG0 969 aa17.83■□□□□ 0.44
COL9A3-206ENST00000466532 YARS2Q9Y2Z4 477 aaKnown RBP17.83■□□□□ 0.44
COL9A3-206ENST00000466532 CSMD2Q7Z408 3487 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 TCRBV9S1A1TA0A576 114 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 SYNDIG1LA6NDD5 238 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 CYR61O00622 381 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 ADAM10O14672 748 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 EIF3HO15372 352 aaKnown RBP eCLIP17.82■□□□□ 0.443e-14■□□□□ 9.9
COL9A3-206ENST00000466532 S100BP04271 92 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-206ENST00000466532 TPOP07202 933 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 CD22P20273 847 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 GP5P40197 560 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 TGM3Q08188 693 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 LAPTM5Q13571 262 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 RCN2Q14257 317 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 ELAVL1Q15717 326 aaKnown RBP17.82■□□□□ 0.44
COL9A3-206ENST00000466532 CMPK2Q5EBM0 449 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 PAGE2BQ5JRK9 111 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 CD163Q86VB7 1156 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 ZFP62Q8NB50 900 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-206ENST00000466532 PDPRQ8NCN5 879 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 FAM57AQ8TBR7 257 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 LURAP1Q96LR2 239 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 F2RL3Q96RI0 385 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 ERP44Q9BS26 406 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 PRM3Q9NNZ6 103 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 PRDM7Q9NQW5 492 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 WHRNQ9P202 907 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 RNF112Q9ULX5 631 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 CLCA3PQ9Y6N3 262 aa17.82■□□□□ 0.44
COL9A3-206ENST00000466532 TACC2O95359 2948 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 MYOCOSA0A1B0GUC4 107 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 FAM187AA6NFU0 413 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 FAM159BA6NKW6 160 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 A8MVJ9 347 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 CCNT2O60583 730 aaKnown RBP17.81■□□□□ 0.44
COL9A3-206ENST00000466532 CTNSO60931 367 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 OR2J2O76002 312 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 TUBB4AP04350 444 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 KIR3DL1P43629 444 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 KCNC1P48547 511 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 RAB10P61026 200 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 IRF8Q02556 426 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 STX4Q12846 297 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 CHIT1Q13231 466 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 EFTUD2Q15029 972 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL9A3-206ENST00000466532 ZKSCAN8Q15776 578 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-206ENST00000466532 HIST2H2ACQ16777 129 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-206ENST00000466532 HIST2H2AA3Q6FI13 130 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 ZNF295-AS1Q8N0V1 137 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 PSD4Q8NDX1 1056 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 SREK1Q8WXA9 508 aaKnown RBP17.81■□□□□ 0.44
COL9A3-206ENST00000466532 ASB15Q8WXK1 588 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 DAZLQ92904 295 aaKnown RBP17.81■□□□□ 0.44
COL9A3-206ENST00000466532 KIAA1191Q96A73 305 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 SDCCAG3Q96C92 435 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 KCNC2Q96PR1 638 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms