RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ZWINTO95229 277 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 HPP00738 406 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 HTR6P50406 440 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 FOXA1P55317 472 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 CSTF3Q12996 717 aaKnown RBP19.12■□□□□ 0.65
SKA3-205ENST00000465471 KCNAB2Q13303 367 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 PCOLCEQ15113 449 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 MFSD4BQ5TF39 518 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 FAAH2Q6GMR7 532 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 MRM1Q6IN84 353 aaKnown RBP19.12■□□□□ 0.65
SKA3-205ENST00000465471 LANCL3Q6ZV70 420 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 ANKRD37Q7Z713 158 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 SCUBE1Q8IWY4 988 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 TMEM52Q8NDY8 209 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 TSLPQ969D9 159 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 CSF3RQ99062 836 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 MAPKAP1Q9BPZ7 522 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 ARHGAP9Q9BRR9 750 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 ZNF700Q9H0M5 742 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 MMACHCQ9Y4U1 282 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 CLDN16Q9Y5I7 305 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 BOD1L1Q8NFC6 3051 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 MASP2O00187 686 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 PSMD12O00232 456 aaPredicted RBP19.11■□□□□ 0.65
SKA3-205ENST00000465471 B4GALT2O60909 372 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 EEDO75530 441 aaKnown RBP19.11■□□□□ 0.65
SKA3-205ENST00000465471 HMOX2P30519 316 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 SERPINB4P48594 390 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 HNRNPFP52597 415 aaKnown RBP19.11■□□□□ 0.65
SKA3-205ENST00000465471 BTG2P78543 158 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 GALNT1Q10472 559 aaPredicted RBP19.11■□□□□ 0.65
SKA3-205ENST00000465471 ABRAXAS2Q15018 415 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 SOWAHCQ53LP3 525 aaPredicted RBP19.11■□□□□ 0.65
SKA3-205ENST00000465471 SGO1Q5FBB7 561 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 NDUFAF7Q7L592 441 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 NUDT13Q86X67 352 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 METTL4Q8N3J2 472 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 METTL21AQ8WXB1 218 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 PRM3Q9NNZ6 103 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 MLXIPLQ9NP71 852 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 PRDM9Q9NQV7 894 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 ADAM29Q9UKF5 820 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 RALYQ9UKM9 306 aaKnown RBP19.11■□□□□ 0.65
SKA3-205ENST00000465471 TIMM22Q9Y584 194 aa19.11■□□□□ 0.65
SKA3-205ENST00000465471 PCDHGA9Q9Y5G4 932 aaKnown RBP19.11■□□□□ 0.65
SKA3-205ENST00000465471 KALRNO60229 2985 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 GOLGA6L10A6NI86 522 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 PRMT3O60678 531 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 ULK1O75385 1050 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 ARRB2P32121 409 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 SERPINB5P36952 375 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 SLC18A1P54219 525 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 HSD17B7P56937 341 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 EEF1A2Q05639 463 aaKnown RBP19.1■□□□□ 0.65
SKA3-205ENST00000465471 TBL3Q12788 808 aaKnown RBP19.1■□□□□ 0.65
SKA3-205ENST00000465471 AIMP2Q13155 320 aaKnown RBP19.1■□□□□ 0.65
SKA3-205ENST00000465471 LY6DQ14210 128 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 RCN2Q14257 317 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 CUZD1Q86UP6 607 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 ZNF595Q8IYB9 648 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 GBP7Q8N8V2 638 aaPredicted RBP19.1■□□□□ 0.65
SKA3-205ENST00000465471 FAM47BQ8NA70 645 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 CLEC1AQ8NC01 280 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 HBEGFQ99075 208 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 WDR77Q9BQA1 342 aaPredicted RBP19.1■□□□□ 0.65
SKA3-205ENST00000465471 MRPL1Q9BYD6 325 aaKnown RBP19.1■□□□□ 0.65
SKA3-205ENST00000465471 ACPTQ9BZG2 426 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 VIPAS39Q9H9C1 493 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 C19orf25Q9UFG5 118 aaPredicted RBP19.1■□□□□ 0.65
SKA3-205ENST00000465471 SLC12A4Q9UP95 1085 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 DOCK10Q96BY6 2186 aa19.1■□□□□ 0.65
SKA3-205ENST00000465471 TCRBV16S1A1N1A0A5B0 115 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 TGFBR3LH3BV60 316 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 BIRC5O15392 142 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 TMPRSS11DO60235 418 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 MAOAP21397 527 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 TPP2P29144 1249 aaPredicted RBP19.09■□□□□ 0.65
SKA3-205ENST00000465471 HNRNPH2P55795 449 aaKnown RBP19.09■□□□□ 0.65
SKA3-205ENST00000465471 MAGOHP61326 146 aaKnown RBP19.09■□□□□ 0.65
SKA3-205ENST00000465471 Q0VFX4 171 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 SLAMF1Q13291 335 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 NSDHLQ15738 373 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 AGBL2Q5U5Z8 902 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 ATG14Q6ZNE5 492 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 RNF165Q6ZSG1 346 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 ZCCHC23Q6ZST2 131 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 HDXQ7Z353 690 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 CPEB2Q7Z5Q1 589 aaKnown RBP19.09■□□□□ 0.65
SKA3-205ENST00000465471 GALNT16Q8N428 558 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 ABHD17AQ96GS6 310 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 PKNOX2Q96KN3 472 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 IMMP1LQ96LU5 166 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 SEMA4CQ9C0C4 833 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 ATP13A2Q9NQ11 1180 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 NECTIN3Q9NQS3 549 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 RIC8BQ9NVN3 520 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 LYARQ9NX58 379 aaKnown RBP19.09■□□□□ 0.65
SKA3-205ENST00000465471 VPS29Q9UBQ0 182 aa19.09■□□□□ 0.65
SKA3-205ENST00000465471 MRPS33Q9Y291 106 aaKnown RBP19.09■□□□□ 0.65
SKA3-205ENST00000465471 ASB4Q9Y574 426 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms