RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 GRIA3P42263 894 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 CCR10P46092 362 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 EFNA3P52797 238 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 CHAF1BQ13112 559 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 CUL1Q13616 776 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 CRYMQ14894 314 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 NCF4Q15080 339 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 KLHL38Q2WGJ6 581 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 RBM20Q5T481 1227 aaKnown RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 TMTC4Q5T4D3 741 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 RNF187Q5TA31 235 aaPredicted RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 STEAP4Q687X5 459 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 FRMPD2BQ6IN97 320 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 MRNIPQ6NTE8 343 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 HIBCHQ6NVY1 386 aaPredicted RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 CYB5D1Q6P9G0 228 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 FIGLAQ6QHK4 219 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 RNF44Q7L0R7 432 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 OTOAQ7RTW8 1153 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 SYVN1Q86TM6 617 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 CNTN4Q8IWV2 1026 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 ENDOVQ8N8Q3 282 aaKnown RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 OR2L3Q8NG85 312 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 APOBEC4Q8WW27 367 aaKnown RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 KCNJ9Q92806 393 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 MR1Q95460 341 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 TTC1Q99614 292 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 MESP1Q9BRJ9 268 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 TRIM51Q9BSJ1 452 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 NLNQ9BYT8 704 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 TRIM4Q9C037 500 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 XAB2Q9HCS7 855 aaKnown RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 ZNF71Q9NQZ8 489 aaPredicted RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 INTS10Q9NVR2 710 aaKnown RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 EURLQ9NYK6 297 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 DHCR7Q9UBM7 475 aaKnown RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 ANAPC5Q9UJX4 755 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 KCND3Q9UK17 655 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 FBXO5Q9UKT4 447 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 IKZF3Q9UKT9 509 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 POLHQ9Y253 713 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 FARSAQ9Y285 508 aaKnown RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 DHRS7Q9Y394 339 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 TEX264Q9Y6I9 313 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 DNAJC13O75165 2243 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 UTP20O75691 2785 aaKnown RBP5.08□□□□□ -1.6
CD46-211ENST00000464082 CACNA1DQ01668 2161 aa5.08□□□□□ -1.6
CD46-211ENST00000464082 NAV2Q8IVL1 2488 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 EXPH5Q8NEV8 1989 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 LOC105369274A0A096LPK9 316 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 LOC102723532A0A0G2JNH3 316 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 MAGEB16A2A368 324 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 E7EQ34 232 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 E7ESA3 106 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 H3BMM5 538 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 J3QKU1 62 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 TTI1O43156 1089 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 ZSCAN12O43309 604 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 SLC28A2O43868 658 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 OR2B3O76000 313 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 SEC31AO94979 1220 aaKnown RBP5.07□□□□□ -1.6
CD46-211ENST00000464082 WISP3O95389 354 aaPredicted RBP5.07□□□□□ -1.6
CD46-211ENST00000464082 TSPAN12O95859 305 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 ERVK-10P10266 1014 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 TCP1P17987 556 aaKnown RBP5.07□□□□□ -1.6
CD46-211ENST00000464082 CYP2A7P20853 494 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 IMPA1P29218 277 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 SKIV2L2P42285 1042 aaKnown RBP5.07□□□□□ -1.6
CD46-211ENST00000464082 CDKN2DP55273 166 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 MRPS25P82663 173 aaKnown RBP5.07□□□□□ -1.6
CD46-211ENST00000464082 MC1RQ01726 317 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 OCA2Q04671 838 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 DUSP2Q05923 314 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 SRSF1Q07955 248 aaKnown RBP eCLIP5.07□□□□□ -1.65e-6■■■■□ 21.8
CD46-211ENST00000464082 FASTKD3Q14CZ7 662 aaKnown RBP5.07□□□□□ -1.6
CD46-211ENST00000464082 TMED2Q15363 201 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 LONRF1Q17RB8 773 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 PRTGQ2VWP7 1150 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 HSP90AA5PQ58FG0 334 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 C1orf189Q5VU69 101 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 CASC4Q6P4E1 433 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 TLDC1Q6P9B6 456 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 ZNF449Q6P9G9 518 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 SUSD1Q6UWL2 747 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 MBOAT1Q6ZNC8 495 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 Q6ZNX1 250 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 NEK10Q6ZWH5 1172 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 PIWIL4Q7Z3Z4 852 aaKnown RBP5.07□□□□□ -1.6
CD46-211ENST00000464082 PPP1R32Q7Z5V6 425 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 GALNT7Q86SF2 657 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 HOOK3Q86VS8 718 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 KCNMB4Q86W47 210 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 PAQR7Q86WK9 346 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 CPNE9Q8IYJ1 553 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 OR4N4Q8N0Y3 316 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 C17orf53Q8N3J3 647 aaPredicted RBP5.07□□□□□ -1.6
CD46-211ENST00000464082 PPFIBP2Q8ND30 876 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 OR9A1PQ8NGU1 263 aa5.07□□□□□ -1.6
CD46-211ENST00000464082 C9orf43Q8TAL5 461 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms