RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PRMT3O60678 531 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 MLYCDO95822 493 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 PDYNP01213 254 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 SERPINA7P05543 415 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 PRR35P0CG20 571 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 ZNF10P21506 573 aaPredicted RBP16.61■□□□□ 0.25
VPS52-214ENST00000463486 NFATC3Q12968 1075 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 AP5B1Q2VPB7 878 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 MFSD4BQ5TF39 518 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 FRMD7Q6ZUT3 714 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 GPRIN3Q6ZVF9 776 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 C10orf107Q8IVU9 208 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 ZCCHC7Q8N3Z6 543 aaKnown RBP16.61■□□□□ 0.25
VPS52-214ENST00000463486 CDYL2Q8N8U2 506 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 TCP10LQ8TDR4 215 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 PPP4R1Q8TF05 950 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 AGAP11Q8TF27 550 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 METTL21AQ8WXB1 218 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 VPS50Q96JG6 964 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 PTCHD1Q96NR3 888 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 TUBB6Q9BUF5 446 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 LHPPQ9H008 270 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 DDX31Q9H8H2 851 aaKnown RBP16.61■□□□□ 0.25
VPS52-214ENST00000463486 PRDM9Q9NQV7 894 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 PCDHGB7Q9Y5F8 929 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 A0A0A6YYD5 115 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 B8ZZF3 427 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 MANBAO00462 879 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 TMPRSS11DO60235 418 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 SEC24DO94855 1032 aaPredicted RBP16.6■□□□□ 0.25
VPS52-214ENST00000463486 SEMA3DO95025 777 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 ESRRBO95718 433 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 ETV4P43268 484 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 SSR2P43308 183 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 PGDP52209 483 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 FOXA1P55317 472 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 PKNOX1P55347 436 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 HSD17B7P56937 341 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 SFT2D3Q587I9 215 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 IGFL2Q6UWQ7 119 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 IGFL3Q6UXB1 125 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 LRIG3Q6UXM1 1119 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 EXOC3L1Q86VI1 746 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 PTRH1Q86Y79 214 aaKnown RBP16.6■□□□□ 0.25
VPS52-214ENST00000463486 CCNYL1Q8N7R7 359 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 FAM47BQ8NA70 645 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 ZBTB9Q96C00 473 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 THOC3Q96J01 351 aaKnown RBP16.6■□□□□ 0.25
VPS52-214ENST00000463486 FAM111AQ96PZ2 611 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 SERPINI1Q99574 410 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 GATA5Q9BWX5 397 aaPredicted RBP16.6■□□□□ 0.25
VPS52-214ENST00000463486 SLC29A3Q9BZD2 475 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 COPS7BQ9H9Q2 264 aaPredicted RBP16.6■□□□□ 0.25
VPS52-214ENST00000463486 RIC8BQ9NVN3 520 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 MMACHCQ9Y4U1 282 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 ASB4Q9Y574 426 aa16.6■□□□□ 0.25
VPS52-214ENST00000463486 PSMD12O00232 456 aaPredicted RBP16.59■□□□□ 0.25
VPS52-214ENST00000463486 CTIFO43310 598 aaKnown RBP16.59■□□□□ 0.25
VPS52-214ENST00000463486 SUV39H1O43463 412 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 ITGA3P26006 1051 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 SOX11P35716 441 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 ARL1P40616 181 aaPredicted RBP16.59■□□□□ 0.25
VPS52-214ENST00000463486 CD97P48960 835 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 HTR6P50406 440 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 HNRNPH2P55795 449 aaKnown RBP16.59■□□□□ 0.25
VPS52-214ENST00000463486 TBL3Q12788 808 aaKnown RBP16.59■□□□□ 0.25
VPS52-214ENST00000463486 IFT88Q13099 833 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 SLAMF1Q13291 335 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 MPP2Q14168 576 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 SGO1Q5FBB7 561 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 CEP85LQ5SZL2 805 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 VWA5B1Q5TIE3 1220 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 LIPMQ5VYY2 423 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 PLAG1Q6DJT9 500 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 ATG14Q6ZNE5 492 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 KBTBD2Q8IY47 623 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 ZNF595Q8IYB9 648 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 RBMXL3Q8N7X1 1067 aaKnown RBP16.59■□□□□ 0.25
VPS52-214ENST00000463486 NFAM1Q8NET5 270 aaPredicted RBP16.59■□□□□ 0.25
VPS52-214ENST00000463486 OR6Y1Q8NGX8 325 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 ADAMTS18Q8TE60 1221 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 PGM2Q96G03 612 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 KCNA7Q96RP8 456 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 SMC6Q96SB8 1091 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 ELOVL6Q9H5J4 265 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 BRF2Q9HAW0 419 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 SENP1Q9P0U3 644 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 C5AR2Q9P296 337 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 C19orf25Q9UFG5 118 aaPredicted RBP16.59■□□□□ 0.25
VPS52-214ENST00000463486 SNX6Q9UNH7 406 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 ATG4BQ9Y4P1 393 aa16.59■□□□□ 0.25
VPS52-214ENST00000463486 EIF4E1BA6NMX2 242 aaKnown RBP16.58■□□□□ 0.24
VPS52-214ENST00000463486 RGS16O15492 202 aaPredicted RBP16.58■□□□□ 0.24
VPS52-214ENST00000463486 PROM1O43490 865 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 CTNSO60931 367 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 ENO1P06733 434 aaKnown RBP16.58■□□□□ 0.24
VPS52-214ENST00000463486 ITGAMP11215 1152 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 CHN1P15882 459 aa16.58■□□□□ 0.24
VPS52-214ENST00000463486 TPP2P29144 1249 aaPredicted RBP16.58■□□□□ 0.24
VPS52-214ENST00000463486 ALDH3A1P30838 453 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms