RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 MORN4Q8NDC4 146 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 FBXO36Q8NEA4 188 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 SRFBP1Q8NEF9 429 aaKnown RBP14.32□□□□□ -0.12
SKA3-204ENST00000462482 OR5L2Q8NGL0 311 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 OR14A16Q8NHC5 309 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 CDKL2Q92772 493 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 CAPZA3Q96KX2 299 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 EFCAB11Q9BUY7 163 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 DEFB127Q9H1M4 99 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 RHOJQ9H4E5 214 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 EHD1Q9H4M9 534 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 SLC24A3Q9HC58 644 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 PSAT1Q9Y617 370 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 APCP25054 2843 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 CTNSO60931 367 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 PPP2R1BP30154 601 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 PAFAH1B1P43034 410 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 LIM2P55344 173 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 POU4F1Q01851 419 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 LAPTM5Q13571 262 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 SERTAD2Q14140 314 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 TGFBIQ15582 683 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 CDKL4Q5MAI5 379 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 NDUFAF5Q5TEU4 345 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 OR5M3Q8NGP4 307 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 ANKRD49Q8WVL7 239 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 PTCD3Q96EY7 689 aaKnown RBP14.31□□□□□ -0.12
SKA3-204ENST00000462482 TRIM31Q9BZY9 425 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 OR8D2Q9GZM6 311 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 DERL2Q9GZP9 239 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 TRMT1Q9NXH9 659 aaKnown RBP14.31□□□□□ -0.12
SKA3-204ENST00000462482 CD274Q9NZQ7 290 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 MYOTQ9UBF9 498 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 COPS7AQ9UBW8 275 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 DAPP1Q9UN19 280 aa14.31□□□□□ -0.12
SKA3-204ENST00000462482 FIGNL2A6NMB9 653 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 FAM90A27PA6NNH2 459 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 FAM166BA8MTA8 275 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 EFCAB8A8MWE9 144 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 WWP2O00308 870 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 DYRK3O43781 588 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 STK16O75716 305 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 SEC31AO94979 1220 aaKnown RBP14.3□□□□□ -0.12
SKA3-204ENST00000462482 COX7A2P14406 83 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 CERS1P27544 350 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 KCNC1P48547 511 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 ATP6V0D1P61421 351 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 PDK4Q16654 411 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 C18orf21Q32NC0 220 aaPredicted RBP14.3□□□□□ -0.12
SKA3-204ENST00000462482 ADPRMQ3LIE5 342 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 SULT1C3Q6IMI6 304 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 ABHD17CQ6PCB6 329 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 OPN5Q6U736 354 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 RTL4Q6ZR62 310 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 ZBED8Q8IZ13 594 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 BBOF1Q8ND07 529 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 OR2M7Q8NG81 312 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 OR52N2Q8NGI0 321 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 LILRB4Q8NHJ6 448 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 UBE2E3Q969T4 207 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 QRFPRQ96P65 431 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 KCNC2Q96PR1 638 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 FAM173AQ9BQD7 235 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 ALOXE3Q9BYJ1 711 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 AICDAQ9GZX7 198 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 LIN28AQ9H9Z2 209 aaKnown RBP14.3□□□□□ -0.12
SKA3-204ENST00000462482 PLSCR2Q9NRY7 297 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 MOCS1Q9NZB8 636 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 ZNF223Q9UK11 482 aaPredicted RBP14.3□□□□□ -0.12
SKA3-204ENST00000462482 RNF6Q9Y252 685 aa14.3□□□□□ -0.12
SKA3-204ENST00000462482 CSMD1Q96PZ7 3565 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 NPIPA2E9PIF3 369 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 NPIPA3F8WFD2 350 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 CCDC188H7C350 402 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 CYR61O00622 381 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 BCKDKO14874 412 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 OR6B1O95007 311 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 P04436 131 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 CCDC166P0CW27 439 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 CNR1P21554 472 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 SOX3P41225 446 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 GPR143P51810 404 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 HNRNPFP52597 415 aaKnown RBP14.29□□□□□ -0.12
SKA3-204ENST00000462482 IRF8Q02556 426 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 PMPCAQ10713 525 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 CAPN12Q6ZSI9 719 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 FAM47EQ6ZV65 393 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 CLYBLQ8N0X4 340 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 TMEM52Q8NDY8 209 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 OR10Q1Q8NGQ4 319 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 OR8K3Q8NH51 312 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 PYROXD1Q8WU10 500 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 SGCZQ96LD1 299 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 RASL10BQ96S79 203 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 KRT12Q99456 494 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 WDR83Q9BRX9 315 aaKnown RBP14.29□□□□□ -0.12
SKA3-204ENST00000462482 TBCDQ9BTW9 1192 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 LYRM4Q9HD34 91 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 SACM1LQ9NTJ5 587 aa14.29□□□□□ -0.12
SKA3-204ENST00000462482 VTI1BQ9UEU0 232 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms