RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ACAD8Q9UKU7 415 aa10.06□□□□□ -0.8
CBX3-205ENST00000462165 MPDZO75970 2070 aa10.06□□□□□ -0.8
CBX3-205ENST00000462165 SYNDIG1LA6NDD5 238 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 A6NNC1 897 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 G3V3Y1 287 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 SYT5O00445 386 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 SERPINA6P08185 405 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 FREM3P0C091 2139 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 GABRA1P14867 456 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 PPP2R1BP30154 601 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 MAN2A2P49641 1150 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 ZNF75DP51815 510 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 DGKQP52824 942 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 HSD17B7P56937 341 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 FOXO1Q12778 655 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 TRIP13Q15645 432 aaPredicted RBP10.05□□□□□ -0.8
CBX3-205ENST00000462165 KCTD19Q17RG1 926 aaPredicted RBP10.05□□□□□ -0.8
CBX3-205ENST00000462165 ZNF750Q32MQ0 723 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 WLSQ5T9L3 541 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 PAMR1Q6UXH9 720 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 WDR53Q7Z5U6 358 aaPredicted RBP10.05□□□□□ -0.8
CBX3-205ENST00000462165 TMEM132CQ8N3T6 1108 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 GOLM1Q8NBJ4 401 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 MCUQ8NE86 351 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 ATL1Q8WXF7 558 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 SARAFQ96BY9 339 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 FBXL8Q96CD0 374 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 LINGO1Q96FE5 620 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 SCYL1Q96KG9 808 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 PWWP2AQ96N64 755 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 SERPINB12Q96P63 405 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 NDNQ99608 321 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 AIF1LQ9BQI0 150 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 FAM167BQ9BTA0 163 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 NPLQ9BXD5 320 aaPredicted RBP10.05□□□□□ -0.8
CBX3-205ENST00000462165 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 XAB2Q9HCS7 855 aaKnown RBP10.05□□□□□ -0.8
CBX3-205ENST00000462165 PRTFDC1Q9NRG1 225 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 ARL15Q9NXU5 204 aa10.05□□□□□ -0.8
CBX3-205ENST00000462165 PABPN1LA6NDY0 278 aaKnown RBP10.04□□□□□ -0.8
CBX3-205ENST00000462165 WWP2O00308 870 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 CLDN4O14493 209 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 HCN1O60741 890 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 FGGP02679 453 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 RAF1P04049 648 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 MAGEA3P43357 314 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 VPS41P49754 854 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 HNRNPFP52597 415 aaKnown RBP10.04□□□□□ -0.8
CBX3-205ENST00000462165 HK2P52789 917 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 RAB38P57729 211 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 BTN3A2P78410 334 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 GPS1Q13098 491 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 SLC10A1Q14973 349 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 DAZAP2Q15038 168 aaPredicted RBP10.04□□□□□ -0.8
CBX3-205ENST00000462165 ELAVL1Q15717 326 aaKnown RBP10.04□□□□□ -0.8
CBX3-205ENST00000462165 HSP90AA5PQ58FG0 334 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 TOR1AIP1Q5JTV8 583 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 NXPE4Q6UWF7 544 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 HSDL2Q6YN16 418 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 RTL4Q6ZR62 310 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 AGGF1Q8N302 714 aaeCLIP10.04□□□□□ -0.8
CBX3-205ENST00000462165 GPATCH11Q8N954 259 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 C2CD4AQ8NCU7 369 aaPredicted RBP10.04□□□□□ -0.8
CBX3-205ENST00000462165 TMEM52Q8NDY8 209 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 WFDC11Q8NEX6 87 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 FAM222BQ8WU58 562 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 SLCO2A1Q92959 643 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 GAL3ST3Q96A11 431 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 SGCZQ96LD1 299 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 TSNARE1Q96NA8 513 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 SH3GL2Q99962 352 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 TRIM54Q9BYV2 358 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 LDAHQ9H6V9 325 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 DMRT3Q9NQL9 472 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 HOMER3Q9NSC5 361 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 IARS2Q9NSE4 1012 aaKnown RBP10.04□□□□□ -0.8
CBX3-205ENST00000462165 SACM1LQ9NTJ5 587 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 CBLCQ9ULV8 474 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 DYRK1BQ9Y463 629 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 PCDHGB3Q9Y5G1 929 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 MAD1L1Q9Y6D9 718 aa10.04□□□□□ -0.8
CBX3-205ENST00000462165 ATP6AP2A0A1C7CYW4 349 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 HSPB2A8KAH6 182 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 ZNF354AO60765 605 aaPredicted RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 ATP6AP2O75787 350 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 ATE1O95260 518 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 CELA3AP09093 270 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 ENO2P09104 434 aaPredicted RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 ENDOUP21128 410 aaKnown RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 HOXC12P31275 282 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 UQCRC1P31930 480 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 DNASE1L1P49184 302 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 ASCL1P50553 236 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 CDKN2DP55273 166 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 IL2P60568 153 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 STXBP1P61764 594 aaKnown RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 CCZ1BP86790 482 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 CCZ1P86791 482 aaPredicted RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 SLC13A2Q13183 592 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 BMPR2Q13873 1038 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms