RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 GDF15Q99988 308 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 TMEM38AQ9H6F2 299 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 REEP4Q9H6H4 257 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 TRBV4-1A0A0J9YWV2 114 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 HMX3A6NHT5 357 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 TLR4O00206 839 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 SAP18O00422 153 aaKnown RBP17.63■□□□□ 0.41
HPS3-204ENST00000462030 HBQ1P09105 142 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 CSTF2P33240 577 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■□□ 19.1
HPS3-204ENST00000462030 SPHARQ15513 63 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 DUSP7Q16829 419 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 CRB2Q5IJ48 1285 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 LILRA3Q8N6C8 439 aaPredicted RBP17.63■□□□□ 0.41
HPS3-204ENST00000462030 SCAMP4Q969E2 229 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 METTL2AQ96IZ6 378 aaKnown RBP17.63■□□□□ 0.41
HPS3-204ENST00000462030 PKP4Q99569 1192 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 BEX2Q9BXY8 128 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 RANGRFQ9HD47 186 aaPredicted RBP17.63■□□□□ 0.41
HPS3-204ENST00000462030 B4GALT6Q9UBX8 382 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 ATP6V1HQ9UI12 483 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 YIPF1Q9Y548 306 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 KIAA1671Q9BY89 1806 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 FADS2P1A8MWK0 482 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 ZNF670-ZNF695F2Z2N8 137 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 FFAR1O14842 300 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 ENDOUP21128 410 aaKnown RBP17.62■□□□□ 0.41
HPS3-204ENST00000462030 MADCAM1Q13477 382 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 KCNC3Q14003 757 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 PRSS53Q2L4Q9 553 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 Q5BKY6 102 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 Q6ZNB5 142 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 ECHDC3Q96DC8 303 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 SLC6A18Q96N87 628 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 WDFY2Q96P53 400 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 SUV39H2Q9H5I1 410 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 FZD3Q9NPG1 666 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 NUFIP1Q9UHK0 495 aaKnown RBP17.62■□□□□ 0.41
HPS3-204ENST00000462030 CMAHPQ9Y471 501 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 MAU2Q9Y6X3 613 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 DSPPQ9NZW4 1301 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 TBKBP1A7MCY6 615 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 PRKCAP17252 672 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 RHCEP18577 417 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 PSMA1P25786 263 aaKnown RBP17.62■□□□□ 0.41
HPS3-204ENST00000462030 CHI3L1P36222 383 aaPredicted RBP17.62■□□□□ 0.41
HPS3-204ENST00000462030 PREPP48147 710 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 ALDH9A1P49189 494 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 LIM2P55344 173 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 PCBP3P57721 371 aaKnown RBP17.62■□□□□ 0.41
HPS3-204ENST00000462030 ZNF763Q0D2J5 394 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 CRHR2Q13324 411 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 ELOAQ14241 798 aaKnown RBP17.62■□□□□ 0.41
HPS3-204ENST00000462030 IER5LQ5T953 404 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 TXNDC8Q6A555 127 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.62■□□□□ 0.41
HPS3-204ENST00000462030 OXR1Q8N573 874 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 SIMC1Q8NDZ2 872 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 SLC7A6Q92536 515 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 ZDHHC6Q9H6R6 413 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 SEC14L4Q9UDX3 406 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 ENOPH1Q9UHY7 261 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 STUB1Q9UNE7 303 aa17.62■□□□□ 0.41
HPS3-204ENST00000462030 SLC16A8O95907 504 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 FHP07954 510 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 SOAT1P35610 550 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 PUM1Q14671 1186 aaKnown RBP eCLIP17.61■□□□□ 0.41
HPS3-204ENST00000462030 LARS2Q15031 903 aaKnown RBP17.61■□□□□ 0.41
HPS3-204ENST00000462030 FAM131AQ6UXB0 335 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 TMPRSS11BQ86T26 416 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 DBF4BQ8NFT6 615 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 ASZ1Q8WWH4 475 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 ZFYVE19Q96K21 471 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 WRAP53Q9BUR4 548 aaKnown RBP17.61■□□□□ 0.41
HPS3-204ENST00000462030 ABCB9Q9NP78 766 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 REV1Q9UBZ9 1251 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 MAPRE3Q9UPY8 281 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 SNX11Q9Y5W9 270 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 DOCK6Q96HP0 2047 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 TET1Q8NFU7 2136 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 SLC35F4A4IF30 521 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 PSIP1O75475 530 aaKnown RBP17.61■□□□□ 0.41
HPS3-204ENST00000462030 LATS1O95835 1130 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 IMPA1P29218 277 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 ACLYP53396 1101 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 RUNX1T1Q06455 604 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 LIPKQ5VXJ0 399 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 FAM180BQ6P0A1 224 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 TRIM40Q6P9F5 258 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 PRR23CQ6ZRP0 262 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 ARMCX6Q7L4S7 300 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 IFNL1Q8IU54 200 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 PCSK9Q8NBP7 692 aaKnown RBP17.61■□□□□ 0.41
HPS3-204ENST00000462030 WDR48Q8TAF3 677 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.61■□□□□ 0.41
HPS3-204ENST00000462030 KLHL6Q8WZ60 621 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 NEIL2Q969S2 332 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 TMEM80Q96HE8 168 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 VN1R3Q9BXE9 311 aa17.61■□□□□ 0.41
HPS3-204ENST00000462030 POLR2J2Q9GZM3 115 aaKnown RBP17.61■□□□□ 0.41
HPS3-204ENST00000462030 C11orf54Q9H0W9 315 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms