RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 FRMD6Q96NE9 622 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 KCNC2Q96PR1 638 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 CSF3RQ99062 836 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 MS4A8Q9BY19 250 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 COPS7BQ9H9Q2 264 aaPredicted RBP17.69■□□□□ 0.42
VARS-220ENST00000461874 OPTCQ9UBM4 332 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 CROCCQ5TZA2 2017 aa17.69■□□□□ 0.42
VARS-220ENST00000461874 A0A087X1B8 175 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 TRBV11-1A0A0K0K1C0 115 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 K7EPI3 171 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 FCHO1O14526 889 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 CTNSO60931 367 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 C2P06681 752 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 MTHFD2P13995 350 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 CA7P43166 264 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 ALDH6A1Q02252 535 aaKnown RBP17.68■□□□□ 0.42
VARS-220ENST00000461874 BMPR2Q13873 1038 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 MAPKAPK3Q16644 382 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 KRTCAP3Q53RY4 240 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 MED27Q6P2C8 311 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.68■□□□□ 0.42
VARS-220ENST00000461874 CLNKQ7Z7G1 428 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 LAS2Q8IYD9 372 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 FAM98AQ8NCA5 519 aaKnown RBP17.68■□□□□ 0.42
VARS-220ENST00000461874 RHEBL1Q8TAI7 183 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 MRRFQ96E11 262 aaKnown RBP17.68■□□□□ 0.42
VARS-220ENST00000461874 VMP1Q96GC9 406 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 GPR137Q96N19 417 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 TBCDQ9BTW9 1192 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 ROGDIQ9GZN7 287 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 LYRM4Q9HD34 91 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 ADAP2Q9NPF8 381 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 KCMF1Q9P0J7 381 aa17.68■□□□□ 0.42
VARS-220ENST00000461874 ZNF223Q9UK11 482 aaPredicted RBP17.68■□□□□ 0.42
VARS-220ENST00000461874 CCDC189A1A4V9 331 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 SYNDIG1LA6NDD5 238 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 SYCE1LA8MT33 242 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 NME2P1O60361 137 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 MLYCDO95822 493 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 NME2P22392 152 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 ATP5A1P25705 553 aaKnown RBP17.67■□□□□ 0.42
VARS-220ENST00000461874 IRF9Q00978 393 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 WHAMMP3Q1A5X7 153 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 FAM83EQ2M2I3 478 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 TMEM35AQ53FP2 167 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 ZNF793Q6ZN11 406 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 SIAH3Q8IW03 269 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 NCLNQ969V3 563 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 TSPAN10Q9H1Z9 355 aaPredicted RBP17.67■□□□□ 0.42
VARS-220ENST00000461874 SNX15Q9NRS6 342 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 FBXW2Q9UKT8 454 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 CACNA1DQ01668 2161 aa17.67■□□□□ 0.42
VARS-220ENST00000461874 CELSR2Q9HCU4 2923 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 CRYBG3Q68DQ2 2970 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 NPIPA5E9PKD4 350 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 CCL21O00585 134 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 SLC19A2O60779 497 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 URI1O94763 535 aaPredicted RBP17.66■□□□□ 0.42
VARS-220ENST00000461874 SCELO95171 688 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 PCNAP12004 261 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 EPB42P16452 691 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 SERPINB1P30740 379 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 ACAP2Q15057 778 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 ELAVL1Q15717 326 aaKnown RBP17.66■□□□□ 0.42
VARS-220ENST00000461874 CHSY3Q70JA7 882 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 RELL1Q8IUW5 271 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 TMEM132CQ8N3T6 1108 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 TEX9Q8N6V9 391 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 ACOT4Q8N9L9 421 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 OR7G3Q8NG95 312 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 TMEM125Q96AQ2 219 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 C16orf45Q96MC5 204 aaPredicted RBP17.66■□□□□ 0.42
VARS-220ENST00000461874 NINJ2Q9NZG7 142 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 SUCOQ9UBS9 1254 aaKnown RBP17.66■□□□□ 0.42
VARS-220ENST00000461874 VTI1BQ9UEU0 232 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 NPIPA1Q9UND3 350 aa17.66■□□□□ 0.42
VARS-220ENST00000461874 A0A096LPK6 155 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 RTCAO00442 366 aaKnown RBP17.65■□□□□ 0.42
VARS-220ENST00000461874 SH3BGRLO75368 114 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 ITGA10O75578 1167 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 KLHL2O95198 593 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 TGFB1P01137 390 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 PHBP35232 272 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 CASP6P55212 293 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 NAA30Q147X3 362 aaPredicted RBP17.65■□□□□ 0.42
VARS-220ENST00000461874 SETDB1Q15047 1291 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 UAP1Q16222 522 aaPredicted RBP17.65■□□□□ 0.42
VARS-220ENST00000461874 AP5B1Q2VPB7 878 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 UBAP2Q5T6F2 1119 aaKnown RBP17.65■□□□□ 0.42
VARS-220ENST00000461874 GRHL2Q6ISB3 625 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 ITLN2Q8WWU7 325 aaPredicted RBP17.65■□□□□ 0.42
VARS-220ENST00000461874 CMTM7Q96FZ5 175 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 CCDC120Q96HB5 630 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 GPR78Q96P69 363 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 MAPKAP1Q9BPZ7 522 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 CCDC77Q9BR77 488 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 ALOXE3Q9BYJ1 711 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 ACSS3Q9H6R3 686 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 PRM3Q9NNZ6 103 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 ADGRE2Q9UHX3 823 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms