RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 SLC12A4Q9UP95 1085 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 CNOT3O75175 753 aaKnown RBP10.08□□□□□ -0.8
UBR4-208ENST00000459947 TNFRSF17Q02223 184 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 ACSM2AQ08AH3 577 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 LACTB2Q53H82 288 aaPredicted RBP10.08□□□□□ -0.8
UBR4-208ENST00000459947 ACSM2BQ68CK6 577 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 GPR180Q86V85 440 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 LRRC34Q8IZ02 419 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 CLYBLQ8N0X4 340 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 ING2Q9H160 280 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 SYNPO2LQ9H987 977 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 ADAP2Q9NPF8 381 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 AHCTF1Q8WYP5 2266 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 NR2F6P10588 404 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 PRPH2P23942 346 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 LIM2P55344 173 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 RHAGQ02094 409 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 SRSF6Q13247 344 aaKnown RBP10.08□□□□□ -0.8
UBR4-208ENST00000459947 SMU1Q2TAY7 513 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 SCUBE1Q8IWY4 988 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 OR14A16Q8NHC5 309 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 MTERF1Q99551 399 aaKnown RBP10.08□□□□□ -0.8
UBR4-208ENST00000459947 SLC25A23Q9BV35 468 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 OR51B5Q9H339 312 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 TMED5Q9Y3A6 229 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 ATP8B1O43520 1251 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 STATHP02808 62 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 DHRS4L1P0CG22 281 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 ETV4P43268 484 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 MYBPC3Q14896 1274 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 VWA2Q5GFL6 755 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 MRM1Q6IN84 353 aaKnown RBP10.08□□□□□ -0.8
UBR4-208ENST00000459947 ANKRD37Q7Z713 158 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 CUZD1Q86UP6 607 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 EFCAB3Q8N7B9 438 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 OR11G2Q8NGC1 345 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 DAZLQ92904 295 aaKnown RBP10.08□□□□□ -0.8
UBR4-208ENST00000459947 PTCHD1Q96NR3 888 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 LMF1Q96S06 567 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 EPS8L2Q9H6S3 715 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 GIMAP4Q9NUV9 329 aa10.08□□□□□ -0.8
UBR4-208ENST00000459947 ZNF860A6NHJ4 632 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 FFAR3O14843 346 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 GPR42O15529 346 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 DRD2P14416 443 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 CERS1P27544 350 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 MAT1AQ00266 395 aaKnown RBP10.07□□□□□ -0.8
UBR4-208ENST00000459947 CRB2Q5IJ48 1285 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 GPR83Q9NYM4 423 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 ACACBO00763 2458 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 IGHV1-45A0A0A0MS14 117 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 A0A0A6YYD5 115 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 VPS4BO75351 444 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 HSPA4LO95757 839 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 PDYNP01213 254 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 FAM58BPP0C7Q3 252 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 BSGP35613 385 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 RPL3P39023 403 aaKnown RBP10.07□□□□□ -0.8
UBR4-208ENST00000459947 MAD2L1Q13257 205 aaPredicted RBP10.07□□□□□ -0.8
UBR4-208ENST00000459947 RUNX2Q13950 521 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 NSDHLQ15738 373 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 CCNYL2Q5T2Q4 361 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 PLAG1Q6DJT9 500 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 KIRREL2Q6UWL6 708 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 IKBIPQ70UQ0 350 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 TRIM46Q7Z4K8 759 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 GALNT16Q8N428 558 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 ATP6V1G3Q96LB4 118 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 PPP3R2Q96LZ3 170 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 MACROD1Q9BQ69 325 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 SLC17A7Q9P2U7 560 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 WDR87Q6ZQQ6 2873 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 TCRBV16S1A1N1A0A5B0 115 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 C1orf226A1L170 272 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 SLCO1B7G3V0H7 640 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 PLPP1O14494 284 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 COX6A1P12074 109 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 MAPK12P53778 367 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 PLIN5Q00G26 463 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 STX4Q12846 297 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 SLAMF1Q13291 335 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 ELAVL1Q15717 326 aaKnown RBP10.07□□□□□ -0.8
UBR4-208ENST00000459947 GALNT18Q6P9A2 607 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 MORN4Q8NDC4 146 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 MMP25Q9NPA2 562 aa10.07□□□□□ -0.8
UBR4-208ENST00000459947 VPS13AQ96RL7 3174 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 IGKV3D-11A0A0A0MRZ8 115 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 UQCRHP07919 91 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 IGLV3-21P80748 117 aaPredicted RBP10.06□□□□□ -0.8
UBR4-208ENST00000459947 KANK2Q63ZY3 851 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 PRSS41Q7RTY9 318 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 UBE3DQ7Z6J8 389 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 NATD1Q8N6N6 113 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 ZNF354BQ96LW1 612 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 CDK15Q96Q40 435 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 SAGE2PA6NJ88 616 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 B4GALT2O60909 372 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 SLITRK5O94991 958 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 ITGA3P26006 1051 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 PSPHP78330 225 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms