RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 NEUROD4Q9HD90 331 aa15.9■□□□□ 0.14
CCDC43-202ENST00000457422 LHX9Q9NQ69 397 aa15.9■□□□□ 0.14
CCDC43-202ENST00000457422 SCN3BQ9NY72 215 aa15.9■□□□□ 0.14
CCDC43-202ENST00000457422 AASSQ9UDR5 926 aa15.9■□□□□ 0.14
CCDC43-202ENST00000457422 PSME2Q9UL46 239 aa15.9■□□□□ 0.14
CCDC43-202ENST00000457422 PRR23AA6NEV1 266 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 PRAMEF25A6NGN4 478 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 PRR19A6NJB7 356 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 STT3AP46977 705 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 DSTNP60981 165 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 RPP38P78345 283 aaKnown RBP15.89■□□□□ 0.13
CCDC43-202ENST00000457422 EMX1Q04741 257 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-202ENST00000457422 MLF2Q15773 248 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-202ENST00000457422 PARM1Q6UWI2 310 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 TMEM184AQ6ZMB5 413 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 ARMC8Q8IUR7 673 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 FAR1Q8WVX9 515 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 THAP11Q96EK4 314 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 PDXPQ96GD0 296 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 C12orf66Q96MD2 445 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 FERD3LQ96RJ6 166 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 INSM2Q96T92 566 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-202ENST00000457422 RMI1Q9H9A7 625 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 CCNB1IP1Q9NPC3 277 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 SLAMF7Q9NQ25 335 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-202ENST00000457422 TESMINQ9Y4I5 508 aa15.89■□□□□ 0.13
CCDC43-202ENST00000457422 RANBP2P49792 3224 aaKnown RBP15.88■□□□□ 0.13
CCDC43-202ENST00000457422 ZNF99A8MXY4 864 aaPredicted RBP15.88■□□□□ 0.13
CCDC43-202ENST00000457422 PDPK1O15530 556 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 ANXA8P13928 327 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 TIE1P35590 1138 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 RAB28P51157 221 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 GP2P55259 537 aaKnown RBP15.88■□□□□ 0.13
CCDC43-202ENST00000457422 PCBP4P57723 403 aaKnown RBP15.88■□□□□ 0.13
CCDC43-202ENST00000457422 RPS21P63220 83 aaKnown RBP15.88■□□□□ 0.13
CCDC43-202ENST00000457422 CSNK1G2P78368 415 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 FGF14Q92915 247 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 RGMAQ96B86 450 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 RPP25Q9BUL9 199 aaKnown RBP15.88■□□□□ 0.13
CCDC43-202ENST00000457422 FUNDC2Q9BWH2 189 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 ABCG4Q9H172 646 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 NKX2-4Q9H2Z4 354 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 TMEM184CQ9NVA4 438 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 KCNK6Q9Y257 313 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 ZNF451Q9Y4E5 1061 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 NDUFS4O43181 175 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 KCNJ13O60928 360 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 CLEC3AO75596 197 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 CD247P20963 164 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 ACVR2AP27037 513 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 CD6P30203 668 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 KIR2DL1P43626 348 aaPredicted RBP15.88■□□□□ 0.13
CCDC43-202ENST00000457422 ALDH9A1P49189 494 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 TRA2BP62995 288 aaKnown RBP15.88■□□□□ 0.13
CCDC43-202ENST00000457422 PRDX1Q06830 199 aaKnown RBP15.88■□□□□ 0.13
CCDC43-202ENST00000457422 NPTX1Q15818 432 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 ANKRD13BQ86YJ7 626 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 CROCCP3Q8IVE0 287 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 OR10G2Q8NGC3 310 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 TBC1D15Q8TC07 691 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 GANCQ8TET4 914 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 CAMK1GQ96NX5 476 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 CSF3RQ99062 836 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 BCL7BQ9BQE9 202 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 PSD2Q9BQI7 771 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 RAB11FIP5Q9BXF6 653 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 DGCR6LQ9BY27 220 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 CCDC90BQ9GZT6 254 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 XKR8Q9H6D3 395 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 PLGRKTQ9HBL7 147 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 ENPP5Q9UJA9 477 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 SLC17A4Q9Y2C5 497 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 PCDHGA6Q9Y5G7 932 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 PCDHGA10Q9Y5H3 936 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 SNX8Q9Y5X2 465 aa15.88■□□□□ 0.13
CCDC43-202ENST00000457422 NDUFS2O75306 463 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 INMTO95050 263 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 HTR1BP28222 390 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 PKLRP30613 574 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 TNFRSF4P43489 277 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 XCR1P46094 333 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 OR1E2P47887 323 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 CSNK2BP67870 215 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 SPIBQ01892 262 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 MICAQ29983 383 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 REEP3Q6NUK4 255 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 KIAA1211LQ6NV74 962 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 SLC16A12Q6ZSM3 486 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 ARHGAP22Q7Z5H3 698 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 ZNF605Q86T29 641 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 TANKQ92844 425 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 FEVQ99581 238 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 BTBD1Q9H0C5 482 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 DDX31Q9H8H2 851 aaKnown RBP15.87■□□□□ 0.13
CCDC43-202ENST00000457422 A4GALTQ9NPC4 353 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 ERVK-18Q9QC07 812 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 WARS2Q9UGM6 360 aaKnown RBP15.87■□□□□ 0.13
CCDC43-202ENST00000457422 PLEKHM1Q9Y4G2 1056 aa15.87■□□□□ 0.13
CCDC43-202ENST00000457422 IGKV1-8A0A0C4DH67 115 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms