RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 SPTA1P02549 2419 aa16.97■□□□□ 0.31
PDLIM2-215ENST00000456545 ZNF462Q96JM2 2506 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 GLRA3O75311 464 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 SORBS2O94875 1100 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 IFNA16P05015 189 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 HIST1H1TP22492 207 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 CPN2P22792 545 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 ATP5F1P24539 256 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 CDH13P55290 713 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 SLC26A5P58743 744 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 FOXK1P85037 733 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 STX4Q12846 297 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 SLAMF1Q13291 335 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 TLR1Q15399 786 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 SGO1Q5FBB7 561 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 Q6ZS92 163 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 UBE3DQ7Z6J8 389 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 TDRPQ86YL5 185 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 CISD2Q8N5K1 135 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 CCDC63Q8NA47 563 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 SUN3Q8TAQ9 357 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 ELOVL6Q9H5J4 265 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 CLMPQ9H6B4 373 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 MMP25Q9NPA2 562 aa16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 COPG1Q9Y678 874 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-215ENST00000456545 TCRBV16S1A1N1A0A5B0 115 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 DLX3O60479 287 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 CDH16O75309 829 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 SBK3P0C264 359 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 TSPAN8P19075 237 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 TNNI3P19429 210 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 TLX1P31314 330 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 TSFMP43897 325 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 HERVK_113P63132 956 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 CLCQ05315 142 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 ZNF169Q14929 603 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 CYP20A1Q6UW02 462 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 ZNF793Q6ZN11 406 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 RPS27LQ71UM5 84 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 CLNKQ7Z7G1 428 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 TMEM151AQ8N4L1 468 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 SLC5A8Q8N695 610 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 AMER2Q8N7J2 671 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 Q8NA96 180 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 CATSPER1Q8NEC5 780 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 OR4F6Q8NGB9 312 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 OR1N1Q8NGS0 311 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 EPS8L3Q8TE67 593 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 TRPC4APQ8TEL6 797 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 ZNF483Q8TF39 744 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 SERPINI1Q99574 410 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 MAPKAP1Q9BPZ7 522 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 ERVK-6Q9BXR3 956 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 SLC29A3Q9BZD2 475 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 ZBTB26Q9HCK0 441 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 MS4A12Q9NXJ0 267 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 PSD3Q9NYI0 1048 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 AHSPQ9NZD4 102 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 GRID1Q9ULK0 1009 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 SNX6Q9UNH7 406 aa16.95■□□□□ 0.3
PDLIM2-215ENST00000456545 BLACEA4D250 179 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 SYNDIG1LA6NDD5 238 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 FOXE1O00358 373 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 COPEO14579 308 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 CTNSO60931 367 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 F10P00742 488 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 RPS17P08708 135 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 MYL2P10916 166 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 IMPDH1P20839 514 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 SOX11P35716 441 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 CUL3Q13618 768 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 MEP1AQ16819 746 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 C10orf62Q5T681 223 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 FRG2Q64ET8 278 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 FCRLBQ6BAA4 426 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 EMBQ6PCB8 327 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 CUZD1Q86UP6 607 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 WDR20Q8TBZ3 569 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 MZB1Q8WU39 189 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 HAS2Q92819 552 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 MIB2Q96AX9 1013 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 CCDC126Q96EE4 140 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 FRG2BQ96QU4 278 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 CSF3RQ99062 836 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 SORBS1Q9BX66 1292 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 PHF11Q9UIL8 331 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 CSAG2Q9Y5P2 127 aa16.94■□□□□ 0.3
PDLIM2-215ENST00000456545 IGKV3D-11A0A0A0MRZ8 115 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 SAGE2PA6NJ88 616 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 FOXO6A8MYZ6 492 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 CYR61O00622 381 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 PLPP1O14494 284 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 MYO1DO94832 1006 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 WDPCPO95876 746 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 HNRNPFP52597 415 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 ARFIP1P53367 373 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 TRAF3Q13114 568 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 ERCC6LQ2NKX8 1250 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 CCDC153Q494R4 210 aa16.93■□□□□ 0.3
PDLIM2-215ENST00000456545 ACER2Q5QJU3 275 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms