RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 APBB3O95704 486 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 COX7A2P14406 83 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 AOAHP28039 575 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 HOXA6P31267 233 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 MAPK9P45984 424 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 GSSP48637 474 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 ALDH9A1P49189 494 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 PNLIPRP1P54315 467 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 LSM3P62310 102 aaKnown RBP12.72□□□□□ -0.37
LINC00343-203ENST00000454555 RBBP4Q09028 425 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 DNASE1L3Q13609 305 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 TIGD6Q17RP2 521 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 IQCCQ4KMZ1 466 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 C10orf62Q5T681 223 aaPredicted RBP12.72□□□□□ -0.37
LINC00343-203ENST00000454555 SLX4IPQ5VYV7 408 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 LAIR1Q6GTX8 287 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 DNAJC22Q8N4W6 341 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 TMEM105Q8N8V8 129 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 APH1BQ8WW43 257 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 PROX1Q92786 737 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 ERLEC1Q96DZ1 483 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 APIPQ96GX9 242 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 C7orf34Q96L11 122 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 APOLD1Q96LR9 279 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 BARD1Q99728 777 aaKnown RBP12.72□□□□□ -0.37
LINC00343-203ENST00000454555 RACGAP1Q9H0H5 632 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 ZNF282Q9UDV7 671 aaPredicted RBP12.72□□□□□ -0.37
LINC00343-203ENST00000454555 TSC22D4Q9Y3Q8 395 aa12.72□□□□□ -0.37
LINC00343-203ENST00000454555 SH3D21A4FU49 640 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 LOC110117498-PIK3R3F6TDL0 507 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 GFYI3L273 518 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 K7ESF4 209 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 MID1O15344 667 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 MAN1A2O60476 641 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 CLDN7O95471 211 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 TIMP2P16035 220 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 TACR1P25103 407 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 DRD3P35462 400 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 HNF1BP35680 557 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 SOX6P35712 828 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 METAP1P53582 386 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 WNT3P56703 355 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 KCNJ10P78508 379 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 UGT8Q16880 541 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 ZNF621Q6ZSS3 439 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 USP30Q70CQ3 517 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 ERN2Q76MJ5 926 aaKnown RBP12.71□□□□□ -0.37
LINC00343-203ENST00000454555 PARS2Q7L3T8 475 aaKnown RBP12.71□□□□□ -0.37
LINC00343-203ENST00000454555 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 KLHDC8AQ8IYD2 350 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 C11orf65Q8NCR3 313 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 HMGB4Q8WW32 186 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 ATL1Q8WXF7 558 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 PIK3R3Q92569 461 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 MTFMTQ96DP5 389 aaKnown RBP12.71□□□□□ -0.37
LINC00343-203ENST00000454555 SLC6A17Q9H1V8 727 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 CHST8Q9H2A9 424 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 TPT1P8Q9HAU6 139 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 TMEM165Q9HC07 324 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 ITM2CQ9NQX7 267 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 DYRK4Q9NR20 520 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 SPATA6Q9NWH7 488 aaPredicted RBP12.71□□□□□ -0.37
LINC00343-203ENST00000454555 VPS29Q9UBQ0 182 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 IFT52Q9Y366 437 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 NCOR1O75376 2440 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 ATG2BQ96BY7 2078 aa12.71□□□□□ -0.37
LINC00343-203ENST00000454555 VCANP13611 3396 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 ARRDC5A6NEK1 342 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 QSOX1O00391 747 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 HAT1O14929 419 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 AXIN1O15169 862 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 ASNA1O43681 348 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 APOA1P02647 267 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 LCKP06239 509 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 ACADMP11310 421 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 ALDH4A1P30038 563 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 HNF4AP41235 474 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 CNTN1Q12860 1018 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 SLC14A1Q13336 389 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 PTCHD3Q3KNS1 767 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 TPRG1LQ5T0D9 272 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 FAM92BQ6ZTR7 304 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 USP45Q70EL2 814 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 CCDC71Q8IV32 467 aaPredicted RBP12.71□□□□□ -0.38
LINC00343-203ENST00000454555 RAB7BQ96AH8 199 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 SCRN2Q96FV2 425 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 MCCC1Q96RQ3 725 aaPredicted RBP12.71□□□□□ -0.38
LINC00343-203ENST00000454555 CCDC32Q9BV29 185 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 RUBCNLQ9H714 662 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 SIAEQ9HAT2 523 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 PRMT8Q9NR22 394 aaPredicted RBP12.71□□□□□ -0.38
LINC00343-203ENST00000454555 THSD1Q9NS62 852 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 CNOT2Q9NZN8 540 aaKnown RBP12.71□□□□□ -0.38
LINC00343-203ENST00000454555 FZD4Q9ULV1 537 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 CFL2Q9Y281 166 aa12.71□□□□□ -0.38
LINC00343-203ENST00000454555 UPK3BL1B0FP48 263 aa12.7□□□□□ -0.38
LINC00343-203ENST00000454555 UPK3BL2E5RIL1 263 aa12.7□□□□□ -0.38
LINC00343-203ENST00000454555 SNPHO15079 494 aa12.7□□□□□ -0.38
LINC00343-203ENST00000454555 SCAMP2O15127 329 aaKnown RBP12.7□□□□□ -0.38
LINC00343-203ENST00000454555 DYRK3O43781 588 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms