RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TACR1P25103 407 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PIGAP37287 484 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RGS4P49798 205 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CLCN2P51788 898 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 AGFG1P52594 562 aaKnown RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HK2P52789 917 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PPP2R2AP63151 447 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CDK16Q00536 496 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PDAP1Q13442 181 aaKnown RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PWP1Q13610 501 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RUNX2Q13950 521 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CSHL1Q14406 222 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PPP1R3AQ16821 1122 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GXYLT1Q4G148 440 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 BICRALQ6AI39 1079 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DRICH1Q6PGQ1 229 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PLXDC2Q6UX71 529 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TMEM64Q6YI46 380 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 B3GNT6Q6ZMB0 384 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CAPN12Q6ZSI9 719 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SEM1Q6ZVN7 128 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 THOC6Q86W42 341 aaKnown RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KRTAP1-3Q8IUG1 177 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PALM2Q8IXS6 379 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 EID3Q8N140 333 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RNF175Q8N4F7 328 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SPATA6LQ8N4H0 392 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 POGLUT1Q8NBL1 392 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 C2CD4AQ8NCU7 369 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 C16orf52Q8NHV5 167 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CREB3L4Q8TEY5 395 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 EXT2Q93063 718 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FBXL8Q96CD0 374 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 VMP1Q96GC9 406 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 JSRP1Q96MG2 331 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RUNDC3BQ96NL0 473 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TTYH2Q9BSA4 534 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HAUS8Q9BT25 410 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SORBS1Q9BX66 1292 aaKnown RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PCBD2Q9H0N5 130 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 EXO5Q9H790 373 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZNF703Q9H7S9 590 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZDHHC11Q9H8X9 412 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 XAB2Q9HCS7 855 aaKnown RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TIMMDC1Q9NPL8 285 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PPANQ9NQ55 473 aaKnown RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PRTFDC1Q9NRG1 225 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TAS2R13Q9NYV9 303 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KCNN3Q9UGI6 736 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CHMP2BQ9UQN3 213 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SLC22A14Q9Y267 594 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NINQ8N4C6 2090 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 EXPH5Q8NEV8 1989 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DOCK7Q96N67 2140 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 A0A1W2PPR1 153 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PABPN1LA6NDY0 278 aaKnown RBP5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KLRC4-KLRK1H3BQV0 150 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SAP18O00422 153 aaKnown RBP5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PROM1O43490 865 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PRAMEF4O60810 478 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCDC175P0C221 793 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZNF37AP17032 561 aaPredicted RBP5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PGAM1P18669 254 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CD22P20273 847 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCND1P24385 295 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GPR143P51810 404 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DGKQP52824 942 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ADAM8P78325 824 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FOLH1Q04609 750 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FOXO1Q12778 655 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ASPHQ12797 758 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 BMPR2Q13873 1038 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FASTKD3Q14CZ7 662 aaKnown RBP5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TSNQ15631 228 aaKnown RBP5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 BBS9Q3SYG4 887 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DCST1Q5T197 706 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 C1orf185Q5T7R7 199 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PRAMEF9Q5VWM5 478 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FAM219BQ5XKK7 198 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DUPD1Q68J44 220 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ADGRD1Q6QNK2 874 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NXPE4Q6UWF7 544 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PAMR1Q6UXH9 720 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZNF793Q6ZN11 406 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DGAT2L6Q6ZPD8 337 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GK5Q6ZS86 529 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FAM47EQ6ZV65 393 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TRILQ7L0X0 811 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SLC22A16Q86VW1 577 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CDC20BQ86Y33 519 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OR4N5Q8IXE1 308 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 C9orf40Q8IXQ3 194 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KLHDC8AQ8IYD2 350 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ARMC10Q8N2F6 343 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FAM109AQ8N4B1 249 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NAT8LQ8N9F0 302 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ARMC2Q8NEN0 867 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OR10G3Q8NGC4 313 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OR4K1Q8NGD4 311 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms