RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TBX6O95947 436 aaPredicted RBP12.04□□□□□ -0.48
CHD3-206ENST00000452447 IFNA16P05015 189 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 PCNAP12004 261 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 HLCSP50747 726 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 LIM2P55344 173 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 STX4Q12846 297 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 DLG1Q12959 904 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 UAP1Q16222 522 aaPredicted RBP12.04□□□□□ -0.48
CHD3-206ENST00000452447 FAM83EQ2M2I3 478 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 MROH9Q5TGP6 573 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 MED27Q6P2C8 311 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 MTFR2Q6P444 385 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.04□□□□□ -0.48
CHD3-206ENST00000452447 APCDD1LQ8NCL9 501 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 NXNL1Q96CM4 212 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 VMP1Q96GC9 406 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 FRMD6Q96NE9 622 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 ATOH8Q96SQ7 321 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 CCDC77Q9BR77 488 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 LRRC1Q9BTT6 524 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 TBCDQ9BTW9 1192 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 TSPAN10Q9H1Z9 355 aaPredicted RBP12.04□□□□□ -0.48
CHD3-206ENST00000452447 ADAP2Q9NPF8 381 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 IGSF5Q9NSI5 407 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 DAPP1Q9UN19 280 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 ASB1Q9Y576 335 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 CLCA3PQ9Y6N3 262 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 SPACA6W5XKT8 324 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 MYO9AB2RTY4 2548 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 A0A087X1B8 175 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 NPIPA5E9PKD4 350 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 KIF2AO00139 706 aaPredicted RBP12.03□□□□□ -0.48
CHD3-206ENST00000452447 NME2P1O60361 137 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 SLC19A2O60779 497 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 CTNSO60931 367 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 URI1O94763 535 aaPredicted RBP12.03□□□□□ -0.48
CHD3-206ENST00000452447 EPB42P16452 691 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 EPORP19235 508 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 NME2P22392 152 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 TRHRP34981 398 aaPredicted RBP12.03□□□□□ -0.48
CHD3-206ENST00000452447 CASP2P42575 452 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 CA7P43166 264 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 HNRNPFP52597 415 aaKnown RBP12.03□□□□□ -0.48
CHD3-206ENST00000452447 GUCY2DQ02846 1103 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 BMPR2Q13873 1038 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 KLC3Q6P597 504 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 CEP128Q6ZU80 1094 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 CHSY3Q70JA7 882 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 CLNKQ7Z7G1 428 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 TMEM132CQ8N3T6 1108 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 TMEM156Q8N614 296 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 RHEBL1Q8TAI7 183 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 KCTD4Q8WVF5 259 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 NCLNQ969V3 563 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 MAGED4Q96JG8 741 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 C16orf45Q96MC5 204 aaPredicted RBP12.03□□□□□ -0.48
CHD3-206ENST00000452447 GPR137Q96N19 417 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 CSF3RQ99062 836 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 PRDM7Q9NQW5 492 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 MTRF1LQ9UGC7 380 aaKnown RBP12.03□□□□□ -0.48
CHD3-206ENST00000452447 NPIPA1Q9UND3 350 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 ANGPTL3Q9Y5C1 460 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 ZNF407Q9C0G0 2248 aa12.03□□□□□ -0.48
CHD3-206ENST00000452447 CACNA1CQ13936 2221 aa12.02□□□□□ -0.48
CHD3-206ENST00000452447 CYR61O00622 381 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 SH3BGRLO75368 114 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 ITGA10O75578 1167 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 ZFAND5O76080 213 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 TGFB1P01137 390 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 C2P06681 752 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 GFAPP14136 432 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 ZNF24P17028 368 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 TYK2P29597 1187 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 PPP2R1BP30154 601 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 SERPINB1P30740 379 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 IRF9Q00978 393 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 ELAVL1Q15717 326 aaKnown RBP12.02□□□□□ -0.49
CHD3-206ENST00000452447 AP5B1Q2VPB7 878 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 TMEM35AQ53FP2 167 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 MYLK4Q86YV6 388 aaPredicted RBP12.02□□□□□ -0.49
CHD3-206ENST00000452447 LAS2Q8IYD9 372 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 CENPLQ8N0S6 344 aaPredicted RBP12.02□□□□□ -0.49
CHD3-206ENST00000452447 SLC34A3Q8N130 599 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 ARMC10Q8N2F6 343 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 TEX9Q8N6V9 391 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 ACOT4Q8N9L9 421 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 TMEM52Q8NDY8 209 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 ZNF473Q8WTR7 871 aaKnown RBP12.02□□□□□ -0.49
CHD3-206ENST00000452447 UBTD2Q8WUN7 234 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 DAZLQ92904 295 aaKnown RBP12.02□□□□□ -0.49
CHD3-206ENST00000452447 CMTM7Q96FZ5 175 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 CENPKQ9BS16 269 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 MS4A8Q9BY19 250 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 ALOXE3Q9BYJ1 711 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 TRIM45Q9H8W5 580 aaPredicted RBP12.02□□□□□ -0.49
CHD3-206ENST00000452447 LYRM4Q9HD34 91 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 SNX15Q9NRS6 342 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 ZDHHC18Q9NUE0 388 aa12.02□□□□□ -0.49
CHD3-206ENST00000452447 PPIEQ9UNP9 301 aaKnown RBP12.02□□□□□ -0.49
CHD3-206ENST00000452447 CLDN16Q9Y5I7 305 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms