RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 FRKP42685 505 aaPredicted RBP13.53□□□□□ -0.24
USP39-207ENST00000450066 POLE2P56282 527 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 ARF3P61204 181 aaPredicted RBP13.53□□□□□ -0.24
USP39-207ENST00000450066 BTN3A2P78410 334 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 BNC1Q01954 994 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 CYP51A1Q16850 503 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 PLK5Q496M5 336 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 C6orf132Q5T0Z8 1188 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 ADGRG5Q8IZF4 528 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 OR4N4Q8N0Y3 316 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 LILRA2Q8N149 483 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 SLC25A45Q8N413 288 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 ZNF655Q8N720 491 aaPredicted RBP13.53□□□□□ -0.24
USP39-207ENST00000450066 SMIM10Q96HG1 83 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 SPATA9Q9BWV2 254 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 LYARQ9NX58 379 aaKnown RBP13.53□□□□□ -0.24
USP39-207ENST00000450066 C15orf41Q9Y2V0 281 aa13.53□□□□□ -0.24
USP39-207ENST00000450066 C1QCP02747 245 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 ST6GAL1P15907 406 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 CDH3P22223 829 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 IL10P22301 178 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 EPHA4P54764 986 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 PCBP4P57723 403 aaKnown RBP13.52□□□□□ -0.24
USP39-207ENST00000450066 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.24
USP39-207ENST00000450066 TRIP10Q15642 601 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 ABHD13Q7L211 337 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.52□□□□□ -0.24
USP39-207ENST00000450066 OR5P2Q8WZ92 322 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 FIG4Q92562 907 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 PKP2Q99959 881 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 VCX3BQ9H321 246 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 C1GALT1Q9NS00 363 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 ATG4BQ9Y4P1 393 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 LRRC42Q9Y546 428 aa13.52□□□□□ -0.24
USP39-207ENST00000450066 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.24
USP39-207ENST00000450066 A0A1W2PR48 441 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 TMEM221A6NGB7 291 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 RHPN2P1A8MT19 583 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 M0R296 226 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 CXCR6O00574 342 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 NUDT21O43809 227 aaKnown RBP13.52□□□□□ -0.25
USP39-207ENST00000450066 KCNK5O95279 499 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 BNIP3Q12983 259 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 TBCELQ5QJ74 424 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 CPZQ66K79 652 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 IRGCQ6NXR0 463 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 ERICH5Q6P6B1 374 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 ARL10Q8N8L6 244 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 C19orf47Q8N9M1 422 aaKnown RBP13.52□□□□□ -0.25
USP39-207ENST00000450066 EXOSC8Q96B26 276 aaKnown RBP13.52□□□□□ -0.25
USP39-207ENST00000450066 ZBED6CLQ96FA7 236 aaPredicted RBP13.52□□□□□ -0.25
USP39-207ENST00000450066 SLC35A5Q9BS91 424 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 TRIM4Q9C037 500 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 RAB33BQ9H082 229 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 IL21RQ9HBE5 538 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 SLAMF7Q9NQ25 335 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 ACSS1Q9NUB1 689 aaPredicted RBP13.52□□□□□ -0.25
USP39-207ENST00000450066 AURKCQ9UQB9 309 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 SDK1Q7Z5N4 2213 aa13.52□□□□□ -0.25
USP39-207ENST00000450066 NUP214P35658 2090 aaPredicted RBP13.52□□□□□ -0.25
USP39-207ENST00000450066 CACNA1EQ15878 2313 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 HNRNPRO43390 633 aaKnown RBP13.51□□□□□ -0.25
USP39-207ENST00000450066 PROM1O43490 865 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 HRO43593 1189 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 PEX1O43933 1283 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 SH3BP5O60239 455 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 RETP07949 1114 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 ZNF10P21506 573 aaPredicted RBP13.51□□□□□ -0.25
USP39-207ENST00000450066 MANFP55145 182 aaKnown RBP13.51□□□□□ -0.25
USP39-207ENST00000450066 MLC1Q15049 377 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 SHBQ15464 509 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 RGNQ15493 299 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 WLSQ5T9L3 541 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 ZCCHC8Q6NZY4 707 aaKnown RBP13.51□□□□□ -0.25
USP39-207ENST00000450066 DGLUCYQ7Z3D6 616 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 CLEC4FQ8N1N0 589 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 TMEM102Q8N9M5 508 aaPredicted RBP13.51□□□□□ -0.25
USP39-207ENST00000450066 PAPD5Q8NDF8 572 aaKnown RBP13.51□□□□□ -0.25
USP39-207ENST00000450066 PNPT1Q8TCS8 783 aaKnown RBP13.51□□□□□ -0.25
USP39-207ENST00000450066 POP5Q969H6 163 aaKnown RBP13.51□□□□□ -0.25
USP39-207ENST00000450066 SERINC2Q96SA4 455 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 CHST8Q9H2A9 424 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 NEUROD4Q9HD90 331 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 C5AR2Q9P296 337 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 LRIT1Q9P2V4 623 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 ANAPC2Q9UJX6 822 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 UTS2RQ9UKP6 389 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 FBXW2Q9UKT8 454 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 RNF215Q9Y6U7 377 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 NCOR1O75376 2440 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 ZDBF2Q9HCK1 2354 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 SLC9B1P1A6NJY1 282 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 AIFM1O95831 613 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 NTRK1P04629 796 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 EIF2S1P05198 315 aaKnown RBP13.51□□□□□ -0.25
USP39-207ENST00000450066 GIMD1P0DJR0 217 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 UQCRC2P22695 453 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 PEX2P28328 305 aa13.51□□□□□ -0.25
USP39-207ENST00000450066 ADRM1Q16186 407 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms