RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 REV1Q9UBZ9 1251 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 KLF15Q9UIH9 416 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 CORO2BQ9UQ03 480 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 MYO1GB0I1T2 1018 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 MUSKO15146 869 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 SSX5O60225 188 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 TLR5O60602 858 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 CREG1O75629 220 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 ABLIM3O94929 683 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 CDK1P06493 297 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 PPIBP23284 216 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 DNAJA1P31689 397 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 RPS19P39019 145 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC11A2P49281 568 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 PSPHP78330 225 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 CIR1Q86X95 450 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 CCDC71Q8IV32 467 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 CDH26Q8IXH8 852 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 OVCA2Q8WZ82 227 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 ASPNQ9BXN1 380 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 BARHL1Q9BZE3 327 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 LRTM1Q9HBL6 345 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 GALPQ9UBC7 116 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 CMAHPQ9Y471 501 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 FAM240BA0A1B0GVZ2 78 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 PIPSLA2A3N6 862 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 PROM1O43490 865 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 PTHP01270 115 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 TSPAN19P0C672 248 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 ACSM4P0C7M7 580 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 LCN1P1Q5VSP4 162 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR4K2Q8NGD2 314 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 APH1BQ8WW43 257 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 AHCYL2Q96HN2 611 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 SORCS2Q96PQ0 1159 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 PSORS1C1Q9UIG5 152 aa12.92□□□□□ -0.34
SYNGAP1-204ENST00000449372 LINC00587B1AMM8 73 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 PCDH17O14917 1159 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 G6PDP11413 515 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 RORCP51449 518 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 LTB4RQ15722 352 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 CPZQ66K79 652 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 SCIMPQ6UWF3 145 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 DLEU7Q6UYE1 221 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 GCNT7Q6ZNI0 430 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 CHMP1BQ7LBR1 199 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZDHHC21Q8IVQ6 265 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 YIPF5Q969M3 257 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 TBC1D20Q96BZ9 403 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 NPAS1Q99742 590 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 SPON2Q9BUD6 331 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 KCTD5Q9NXV2 234 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 VNN3Q9NY84 501 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 ARL5AQ9Y689 179 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 CDC7O00311 574 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 WNT9AO14904 365 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 PER2O15055 1255 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 GJB3O75712 270 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 TACR2P21452 398 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 ACVRL1P37023 503 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 RPP38P78345 283 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 GLYR1Q49A26 553 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 HSD17B12Q53GQ0 312 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 KDM4DQ6B0I6 523 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 GPR149Q86SP6 731 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 ENTHD1Q8IYW4 607 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR6C4Q8NGE1 309 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR13C4Q8NGS5 318 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 CEP76Q8TAP6 659 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZNF689Q96CS4 500 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 KCNH6Q9H252 994 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 DCAF13Q9NV06 445 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 CUEDC1Q9NWM3 386 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 SESN1Q9Y6P5 492 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 DENND4CQ5VZ89 1909 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZNF840PA6NDX5 716 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 ORC5O43913 435 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 PQBP1O60828 265 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 LDOC1O95751 146 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 PLATP00750 562 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 STSP08842 583 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 HOXD9P28356 352 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 SSTR4P31391 388 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR2T5Q6IEZ7 315 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC39A5Q6ZMH5 540 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 RNF165Q6ZSG1 346 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 CCDC36Q8IYA8 594 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 STX19Q8N4C7 294 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 C19orf18Q8NEA5 215 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 SRFBP1Q8NEF9 429 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 LPCAT1Q8NF37 534 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR10Q1Q8NGQ4 319 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR2T29Q8NH02 315 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 MTERF3Q96E29 417 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 DIRAS2Q96HU8 199 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 IGSF21Q96ID5 467 aa12.91□□□□□ -0.34
SYNGAP1-204ENST00000449372 WDFY2Q96P53 400 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms