RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 MRPL1Q9BYD6 325 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ROPN1BQ9BZX4 212 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SEC61A2Q9H9S3 476 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MEAF6Q9HAF1 191 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ROPN1Q9HAT0 212 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 LRTM1Q9HBL6 345 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 LRFN1Q9P244 771 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MARCOQ9UEW3 520 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 NPHS1O60500 1241 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 WISP1O95388 367 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 PVRP15151 417 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 LSSP48449 732 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SGSHP51688 502 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 RUNX2Q13950 521 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 PTPRCAPQ14761 206 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 RAB39AQ14964 217 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ISXQ2M1V0 245 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 CXorf57Q6NSI4 855 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 C11orf88Q6PI97 169 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 GPR137CQ8N3F9 429 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ENDOVQ8N8Q3 282 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 C19orf47Q8N9M1 422 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 KCNN1Q92952 543 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZUFSPQ96AP4 578 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPOCK3Q9BQ16 436 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR51B6Q9H340 312 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 PILRBQ9UKJ0 227 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC22A14Q9Y267 594 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ATAD5Q96QE3 1844 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM92AA1XBS5 289 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 NUDT19A8MXV4 375 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 K7EPI3 171 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC25A17O43808 307 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 RBMXL2O75526 392 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF883P0CG24 379 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 RPL38P63173 70 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 GPR18Q14330 331 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 CHI3L2Q15782 390 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF766Q5HY98 468 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 NAIF1Q69YI7 327 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 NXPE4Q6UWF7 544 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 GPR180Q86V85 440 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPACA3Q8IXA5 215 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR2L2Q8NH16 312 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 GCDHQ92947 438 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 CENPTQ96BT3 561 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZBED6CLQ96FA7 236 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SNX15Q9NRS6 342 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 PCDHGB2Q9Y5G2 931 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 PIKFYVEQ9Y2I7 2098 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 A0A0A6YYC8 382 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 I3L1I5 382 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 GNB5O14775 395 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 LRRTM2O43300 516 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 CCDC22O60826 627 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 EEF1B2P24534 225 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 HOXA6P31267 233 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 EIF1AXP47813 144 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 VSNL1P62760 191 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 MPP1Q00013 466 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 MRPL28Q13084 256 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 LARS2Q15031 903 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 TSNQ15631 228 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC14A2Q15849 920 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 RUNDC3AQ59EK9 446 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 CPTPQ5TA50 214 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 THOC6Q86W42 341 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC35F3Q8IY50 421 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 AGGF1Q8N302 714 aaeCLIP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 WDTC1Q8N5D0 677 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 DHRS1Q96LJ7 313 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SHARPINQ9H0F6 387 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 NARFLQ9H6Q4 476 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 INTS6Q9UL03 887 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ACTL7AQ9Y615 435 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 PCM1Q15154 2024 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 DUXAA6NLW8 204 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 AP3D1O14617 1153 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF749O43361 778 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 PSIP1O75475 530 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 ERVPABLB-1P60509 514 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 CSTF3Q12996 717 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SEMA5AQ13591 1074 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 EXT1Q16394 746 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 AGBL4Q5VU57 503 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM91A1Q658Y4 838 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 FCRL6Q6DN72 434 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 NEK10Q6ZWH5 1172 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 GALNT12Q8IXK2 581 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 NAXEQ8NCW5 288 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM129BQ96TA1 746 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 CCL19Q99731 98 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 LRRC61Q9BV99 259 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 LRRC19Q9H756 370 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 MBNL1Q9NR56 388 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 DNAJB12Q9NXW2 375 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 EMC3Q9P0I2 261 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL17CQ9P0M4 197 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 LHX3Q9UBR4 397 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 DCTN4Q9UJW0 460 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms