RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ARHGAP10A1A4S6 786 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 OR2W5A6NFC9 320 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 A6NL46 340 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 FAM227AF5H4B4 570 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 PLPP1O14494 284 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 KLHL41O60662 606 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 DNAJB5O75953 348 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 SEMA3DO95025 777 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 SCELO95171 688 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 ZWINTO95229 277 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 NEFHP12036 1026 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 HSD3B1P14060 373 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 CPN2P22792 545 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 ITGA3P26006 1051 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 HSD3B2P26439 372 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 TLX1P31314 330 aaPredicted RBP13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 RHAGQ02094 409 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 SLAMF1Q13291 335 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 LY6DQ14210 128 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 TMEM205Q6UW68 189 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 QSOX2Q6ZRP7 698 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 PAGE2Q7Z2X7 111 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 CPEB2Q7Z5Q1 589 aaKnown RBP13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 NUDT13Q86X67 352 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 NUDCD3Q8IVD9 361 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 HOMEZQ8IX15 550 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 SHISA5Q8N114 240 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 EXD3Q8N9H8 876 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 FAM47BQ8NA70 645 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 SLC25A23Q9BV35 468 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 MECRQ9BV79 373 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 SORBS1Q9BX66 1292 aaKnown RBP13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 SHCBP1LQ9BZQ2 653 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 ZNF160Q9HCG1 818 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 PRDM9Q9NQV7 894 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 PRTFDC1Q9NRG1 225 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 FARSBQ9NSD9 589 aaKnown RBP13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 RIC8BQ9NVN3 520 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 MS4A12Q9NXJ0 267 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 FBXW2Q9UKT8 454 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 MMACHCQ9Y4U1 282 aa13.2□□□□□ -0.3
GTF3C3-206ENST00000448539 LOC102723996A0A087X1L8 192 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 IGHV1-45A0A0A0MS14 117 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 BLACEA4D250 179 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 UBFD1O14562 309 aaKnown RBP13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 NPHS1O60500 1241 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 ETHE1O95571 254 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 BPGMP07738 259 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 ICAM2P13598 275 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 H2AFXP16104 143 aaPredicted RBP13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 SERPINB4P48594 390 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 OR4D2P58180 307 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 AP2B1P63010 937 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 ZNF33BQ06732 778 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 CSTF3Q12996 717 aaKnown RBP13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 SLC13A2Q13183 592 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 TCHHL1Q5QJ38 904 aaPredicted RBP13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 LANCL3Q6ZV70 420 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 ANKRD37Q7Z713 158 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 PARP9Q8IXQ6 854 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 ZNF595Q8IYB9 648 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 ZCCHC7Q8N3Z6 543 aaKnown RBP13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 GALNT16Q8N428 558 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 GOLGA6L1Q8N7Z2 621 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 GBP7Q8N8V2 638 aaPredicted RBP13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 C9orf43Q8TAL5 461 aaPredicted RBP13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 ABHD17AQ96GS6 310 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 HBEGFQ99075 208 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 MAPKAP1Q9BPZ7 522 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 TUBB6Q9BUF5 446 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 ZNF700Q9H0M5 742 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 DDX31Q9H8H2 851 aaKnown RBP13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 LYARQ9NX58 379 aaKnown RBP13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 VPS29Q9UBQ0 182 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 PHF11Q9UIL8 331 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 TIMM22Q9Y584 194 aa13.19□□□□□ -0.3
GTF3C3-206ENST00000448539 CCDC88CQ9P219 2028 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 WDR91A4D1P6 747 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 SYNDIG1LA6NDD5 238 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 EEDO75530 441 aaKnown RBP13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 SEC24DO94855 1032 aaPredicted RBP13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 CHEK2O96017 543 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 UQCRHP07919 91 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 UROSP10746 265 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 COX6A1P12074 109 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 MAOAP21397 527 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 BSGP35613 385 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 SERPINB5P36952 375 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 BUD31P41223 144 aaPredicted RBP13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 ETV4P43268 484 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 HSD17B7P56937 341 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 MAGOHP61326 146 aaKnown RBP13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 BTG2P78543 158 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 IMPG1Q17R60 797 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 SFT2D3Q587I9 215 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 HHATQ5VTY9 493 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 ZCCHC23Q6ZST2 131 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 CUZD1Q86UP6 607 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms