RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 CRELD1Q96HD1 420 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 FERD3LQ96RJ6 166 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 MCCC1Q96RQ3 725 aaPredicted RBP12.54□□□□□ -0.4
DDX56-206ENST00000446987 FAM129BQ96TA1 746 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 PITX2Q99697 317 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 FANCFQ9NPI8 374 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 ZNF224Q9NZL3 707 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 SLC25A13Q9UJS0 675 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 NDRG4Q9ULP0 352 aaKnown RBP12.54□□□□□ -0.4
DDX56-206ENST00000446987 MAPRE3Q9UPY8 281 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 GPR45Q9Y5Y3 372 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 CACNG2Q9Y698 323 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 RNF215Q9Y6U7 377 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 ANKRD36A6QL64 1941 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 CEP192Q8TEP8 1941 aa12.54□□□□□ -0.4
DDX56-206ENST00000446987 ABCA7Q8IZY2 2146 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 A0A0B4J293 547 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 CXorf51AA0A1B0GTR3 108 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 E9PQ18 207 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 GNGT2O14610 69 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 RGS5O15539 181 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 NOBOXO60393 691 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 ERN1O75460 977 aaKnown RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 TGM6O95932 706 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 IFNA7P01567 189 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 IFNA14P01570 189 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 OR4D2P58180 307 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 POU4F1Q01851 419 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 PCDH1Q08174 1060 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 IGSF11Q5DX21 431 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 SPESP1Q6UW49 350 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 CACUL1Q86Y37 369 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 GHDCQ8N2G8 530 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 STX19Q8N4C7 294 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 DUSP18Q8NEJ0 188 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 WDR48Q8TAF3 677 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 RNF31Q96EP0 1072 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 TEKT5Q96M29 485 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 KLHL15Q96M94 604 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 FAM126AQ9BYI3 521 aaPredicted RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 SHARPINQ9H0F6 387 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 RSPH9Q9H1X1 276 aaPredicted RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 LDAHQ9H6V9 325 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 TNFRSF12AQ9NP84 129 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 MED9Q9NWA0 146 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 CUEDC1Q9NWM3 386 aaPredicted RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 FAM8A1Q9UBU6 413 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 FCF1Q9Y324 198 aaKnown RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 PCDHGA2Q9Y5H1 932 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 GPR179Q6PRD1 2367 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 PCM1Q15154 2024 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 EDDM13A0A1B0GTR0 161 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 A0A1W2PQ09 198 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 RPS10-NUDT3A0A1W2PQS6 291 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 ASPDHA6ND91 283 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 KHNYNO15037 678 aaKnown RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 PRAMEF11O60813 436 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 RAF1P04049 648 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 CTSLP07711 333 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 NCF1P14598 390 aaPredicted RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 ST8SIA6P61647 398 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 NHLH1Q02575 133 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 RPS6KA2Q15349 733 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 STK40Q8N2I9 435 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 DTWD1Q8N5C7 304 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 OR8J3Q8NGG0 315 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 OR5T2Q8NGG2 359 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 OR2A12Q8NGT7 310 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 BTN2A2Q8WVV5 523 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 ST8SIA4Q92187 359 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 TUBGCP3Q96CW5 907 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 SGTBQ96EQ0 304 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 BRINP2Q9C0B6 783 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 TNKS2Q9H2K2 1166 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 ZIM2Q9NZV7 527 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 USP36Q9P275 1121 aaKnown RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.53□□□□□ -0.4
DDX56-206ENST00000446987 FIS1Q9Y3D6 152 aa12.53□□□□□ -0.4
DDX56-206ENST00000446987 FAM234BA2RU67 622 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 MYL12BO14950 172 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 CD3EAPO15446 510 aaKnown RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 MAFKO60675 156 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 RHOBTB1O94844 696 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 SCELO95171 688 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 PRR35P0CG20 571 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 MYL12AP19105 171 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 BCKDHBP21953 392 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 IGFBP5P24593 272 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 PSMB4P28070 264 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 P2RY2P41231 377 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 NBL1P41271 181 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 RRAS2P62070 204 aaPredicted RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 RPS14P62263 151 aaKnown RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 MRPL28Q13084 256 aaKnown RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 IRF3Q14653 427 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 TMPRSS11AQ6ZMR5 421 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms