RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 EGLN2Q96KS0 407 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 CATSPER2Q96P56 530 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 SPRY4Q9C004 299 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 IFT80Q9P2H3 777 aaPredicted RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 DAPP1Q9UN19 280 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 MAP4K5Q9Y4K4 846 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 PCDHGA7Q9Y5G6 932 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 SPACA6W5XKT8 324 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 KNTC1P50748 2209 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 FAM227AF5H4B4 570 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 PSMD12O00232 456 aaPredicted RBP16.45■□□□□ 0.22
SGCE-206ENST00000445866 PROM1O43490 865 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 RNH1P13489 461 aaKnown RBP16.45■□□□□ 0.22
SGCE-206ENST00000445866 IDO1P14902 403 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 ACPPP15309 386 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 SDC1P18827 310 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 CPN2P22792 545 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 NME5P56597 212 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 ZNF763Q0D2J5 394 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 C2orf80Q0P641 193 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 ERV3-1Q14264 604 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 RTP5Q14D33 572 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 GSTA3Q16772 222 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 LCN10Q6JVE6 187 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 TIPARPQ7Z3E1 657 aaKnown RBP16.45■□□□□ 0.22
SGCE-206ENST00000445866 SHISA5Q8N114 240 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 TMEM132CQ8N3T6 1108 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 GFM2Q969S9 779 aaKnown RBP16.45■□□□□ 0.22
SGCE-206ENST00000445866 PEX11GQ96HA9 241 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 DPH2Q9BQC3 489 aaPredicted RBP16.45■□□□□ 0.22
SGCE-206ENST00000445866 CHST8Q9H2A9 424 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 SLC22A11Q9NSA0 550 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 MS4A12Q9NXJ0 267 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 ASIC5Q9NY37 505 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 PHF11Q9UIL8 331 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 WBP11Q9Y2W2 641 aaKnown RBP16.45■□□□□ 0.22
SGCE-206ENST00000445866 ARL2BPQ9Y2Y0 163 aa16.45■□□□□ 0.22
SGCE-206ENST00000445866 PCM1Q15154 2024 aa16.44■□□□□ 0.22
SGCE-206ENST00000445866 A0A1W2PR48 441 aa16.44■□□□□ 0.22
SGCE-206ENST00000445866 AKAP10O43572 662 aa16.44■□□□□ 0.22
SGCE-206ENST00000445866 IL3P08700 152 aa16.44■□□□□ 0.22
SGCE-206ENST00000445866 HNRNPH2P55795 449 aaKnown RBP16.44■□□□□ 0.22
SGCE-206ENST00000445866 ZNF385CQ66K41 422 aaPredicted RBP16.44■□□□□ 0.22
SGCE-206ENST00000445866 OVCH1Q7RTY7 1134 aa16.44■□□□□ 0.22
SGCE-206ENST00000445866 AIG1Q9NVV5 245 aa16.44■□□□□ 0.22
SGCE-206ENST00000445866 WASF3Q9UPY6 502 aa16.44■□□□□ 0.22
SGCE-206ENST00000445866 GPR45Q9Y5Y3 372 aa16.44■□□□□ 0.22
SGCE-206ENST00000445866 CDRT15L2A8MXV6 281 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 BRINP1O60477 761 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 LRATO95237 230 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 BUD31P41223 144 aaPredicted RBP16.43■□□□□ 0.22
SGCE-206ENST00000445866 XCR1P46094 333 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 ASMTP46597 345 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 MC1RQ01726 317 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 OCA2Q04671 838 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 PTGR1Q14914 329 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 HEPACAMQ14CZ8 416 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 NDUFAF5Q5TEU4 345 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 C18orf63Q68DL7 685 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 IGF2-ASQ6U949 168 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 FAM9CQ8IZT9 166 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.43■□□□□ 0.22
SGCE-206ENST00000445866 TBC1D20Q96BZ9 403 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 FAIM2Q9BWQ8 316 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 WDR41Q9HAD4 459 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 MKKSQ9NPJ1 570 aaPredicted RBP16.43■□□□□ 0.22
SGCE-206ENST00000445866 ASCL3Q9NQ33 180 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 THSD1Q9NS62 852 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 TEX10Q9NXF1 929 aaPredicted RBP16.43■□□□□ 0.22
SGCE-206ENST00000445866 ZNF282Q9UDV7 671 aaPredicted RBP16.43■□□□□ 0.22
SGCE-206ENST00000445866 GPN3Q9UHW5 284 aaPredicted RBP16.43■□□□□ 0.22
SGCE-206ENST00000445866 GLOD5A6NK44 160 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 STMND1H3BQB6 276 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 CYR61O00622 381 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 PGRMC2O15173 223 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 B4GALT2O60909 372 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 DXOO77932 396 aaKnown RBP16.43■□□□□ 0.22
SGCE-206ENST00000445866 DLGAP3O95886 979 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 ONECUT2O95948 504 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 PCSK2P16519 638 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 GSTM5P46439 218 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 ALDH9A1P49189 494 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 RAB38P57729 211 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 STX1BP61266 288 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 SHC2P98077 582 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 VWA2Q5GFL6 755 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 FAM71E1Q6IPT2 247 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 MTDHQ86UE4 582 aaKnown RBP16.43■□□□□ 0.22
SGCE-206ENST00000445866 MMP21Q8N119 569 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 MIER2Q8N344 545 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 ESX1Q8N693 406 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 FAM47BQ8NA70 645 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 CCDC197Q8NCU1 140 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 DPY30Q9C005 99 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 RPF2Q9H7B2 306 aaKnown RBP16.43■□□□□ 0.22
SGCE-206ENST00000445866 MYNNQ9NPC7 610 aa16.43■□□□□ 0.22
SGCE-206ENST00000445866 WASHC1A8K0Z3 465 aa16.42■□□□□ 0.22
SGCE-206ENST00000445866 C9J4A7 227 aa16.42■□□□□ 0.22
SGCE-206ENST00000445866 BMP10O95393 424 aa16.42■□□□□ 0.22
SGCE-206ENST00000445866 FHP07954 510 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms