RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 MAL2Q969L2 176 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 MCUBQ9NWR8 336 aa15.98■□□□□ 0.15
TCOF1-206ENST00000445265 OR7A17O14581 309 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 KMOO15229 486 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 B3GALT2O43825 422 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 SLC16A8O95907 504 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 MMP2P08253 660 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 PCSK6P29122 969 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 GJA8P48165 433 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 PHC1P78364 1004 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 PDGFRLQ15198 375 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 MPP7Q5T2T1 576 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 AFMIDQ63HM1 303 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 ZCCHC10Q8TBK6 192 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 SLC22A18Q96BI1 424 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 GPR83Q9NYM4 423 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 NKIRAS2Q9NYR9 191 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 CLEC4AQ9UMR7 237 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 EXOSC1Q9Y3B2 195 aaKnown RBP15.97■□□□□ 0.15
TCOF1-206ENST00000445265 IRAK3Q9Y616 596 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 PRSS21Q9Y6M0 314 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 ADAP00813 363 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 LASP1Q14847 261 aaKnown RBP15.97■□□□□ 0.15
TCOF1-206ENST00000445265 NXPE4Q6UWF7 544 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 COMMD6Q7Z4G1 85 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 IQCHQ86VS3 1027 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 TCEAL8Q8IYN2 117 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 NAGSQ8N159 534 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 BBS10Q8TAM1 723 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 BPIFB1Q8TDL5 484 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 PHOX2BQ99453 314 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 HERC2P3Q9BVR0 1158 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 PCDHGA10Q9Y5H3 936 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 TRAM2Q15035 370 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 WSCD2Q2TBF2 565 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 CPPED1Q9BRF8 314 aaPredicted RBP15.97■□□□□ 0.15
TCOF1-206ENST00000445265 SRMSQ9H3Y6 488 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 ADAP2Q9NPF8 381 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 PRRC2BQ5JSZ5 2229 aaKnown RBP15.97■□□□□ 0.15
TCOF1-206ENST00000445265 GADD45AP24522 165 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 FAUP35544 74 aaKnown RBP15.97■□□□□ 0.15
TCOF1-206ENST00000445265 EIF4HQ15056 248 aaKnown RBP15.97■□□□□ 0.15
TCOF1-206ENST00000445265 UNC5DQ6UXZ4 953 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 FAM124AQ86V42 546 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.97■□□□□ 0.159e-8■□□□□ 9.8
TCOF1-206ENST00000445265 SLC2A11Q9BYW1 496 aa15.97■□□□□ 0.15
TCOF1-206ENST00000445265 TEX28O15482 410 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 CST5P28325 142 aaPredicted RBP15.96■□□□□ 0.15
TCOF1-206ENST00000445265 NDUFS1P28331 727 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 PCDH1Q08174 1060 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 DSG2Q14126 1118 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 SBSNQ6UWP8 590 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 CCBE1Q6UXH8 406 aaPredicted RBP15.96■□□□□ 0.15
TCOF1-206ENST00000445265 CBLL1Q75N03 491 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 ACSL6Q9UKU0 697 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 NDUFS4O43181 175 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 ATF6P18850 670 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 IGFBP6P24592 240 aaPredicted RBP15.96■□□□□ 0.15
TCOF1-206ENST00000445265 CCR7P32248 378 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 ACSL1P33121 698 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 AP3S2P59780 193 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 NRSN1Q8IZ57 195 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 CADM2Q8N3J6 435 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 HDDC3Q8N4P3 179 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 MEIOBQ8N635 442 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 NDNFQ8TB73 568 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 FRMD6Q96NE9 622 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 CITED4Q96RK1 184 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 SMURF1Q9HCE7 757 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 TRBV23OR9-2A0A075B6M9 112 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 PTTG1O95997 202 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 ACRP10323 421 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 UGT3A2Q3SY77 523 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 TBC1D15Q8TC07 691 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 ISG20Q96AZ6 181 aaKnown RBP15.96■□□□□ 0.15
TCOF1-206ENST00000445265 TRMT2BQ96GJ1 504 aaKnown RBP15.96■□□□□ 0.15
TCOF1-206ENST00000445265 DIABLOQ9NR28 239 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 PLAGL1Q9UM63 463 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 TMEM98Q9Y2Y6 226 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 INSL6Q9Y581 213 aa15.96■□□□□ 0.15
TCOF1-206ENST00000445265 RFPL2O75678 378 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 SERPINA3P01011 423 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 HRH2P25021 359 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 CSTF1Q05048 431 aaKnown RBP15.96■□□□□ 0.14
TCOF1-206ENST00000445265 MICAQ29983 383 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 ZNF433Q8N7K0 673 aaPredicted RBP15.96■□□□□ 0.14
TCOF1-206ENST00000445265 TMEM145Q8NBT3 493 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 MUL1Q969V5 352 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 SLCO4A1Q96BD0 722 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 CLIP3Q96DZ5 547 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 CASD1Q96PB1 797 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 ZNF300Q96RE9 604 aaPredicted RBP15.96■□□□□ 0.14
TCOF1-206ENST00000445265 TIGARQ9NQ88 270 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 SOHLH2Q9NX45 425 aa15.96■□□□□ 0.14
TCOF1-206ENST00000445265 LRRC72A6NJI9 287 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 H7BY64 318 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 RNASET2O00584 256 aaKnown RBP15.95■□□□□ 0.14
TCOF1-206ENST00000445265 GPR37L1O60883 481 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 ENTPD6O75354 484 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 CKMT1AP12532 417 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms