RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 STX16-NPEPL1H3BU86 382 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 E2F3O00716 465 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 STX16O14662 325 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 CTNSO60931 367 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 SNRPAP09012 282 aaKnown RBP17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 HIST1H1TP22492 207 aaPredicted RBP17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 ATP5A1P25705 553 aaKnown RBP17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 SLC13A2Q13183 592 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 TUBA3CQ13748 450 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 GTF2H2Q13888 395 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 AP5B1Q2VPB7 878 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 DEPDC1Q5TB30 811 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 GTF2H2CQ6P1K8 395 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 TUBA3EQ6PEY2 450 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 ACOT4Q8N9L9 421 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 L3MBTL4Q8NA19 623 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 B3GNT7Q8NFL0 401 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 DNAJB8Q8NHS0 232 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 HUS1BQ8NHY5 278 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 MAGEB10Q96LZ2 347 aaPredicted RBP17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 TAAR6Q96RI8 345 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 MRPL57Q9BQC6 102 aaKnown RBP17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 UTP23Q9BRU9 249 aaKnown RBP17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 CENPKQ9BS16 269 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 IPPKQ9H8X2 491 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 CPSF2Q9P2I0 782 aaKnown RBP17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 FETUBQ9UGM5 382 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 SPACA6W5XKT8 324 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 HIVEP3Q5T1R4 2406 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 TRIM49D1C9J1S8 452 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 SEMA7AO75326 666 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 RASAL1O95294 804 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 DDAH2O95865 285 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 F10P00742 488 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 TGFB1P01137 390 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 CRYABP02511 175 aaKnown RBP17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 PCNAP12004 261 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 CD96P40200 585 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 PHEXP78562 749 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 C10orf62Q5T681 223 aaPredicted RBP17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 FCRLBQ6BAA4 426 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 ZNF793Q6ZN11 406 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 TIFABQ6ZNK6 161 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 GOLGA7Q7Z5G4 137 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 LCA5Q86VQ0 697 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 HORMAD2Q8N7B1 307 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 PTGR2Q8N8N7 351 aaPredicted RBP17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 EIF1ADQ8N9N8 165 aaKnown RBP17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 APCDD1LQ8NCL9 501 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 MDS2Q8NDY4 140 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 SSC4DQ8WTU2 575 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 NR4A3Q92570 626 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 MTBPQ96DY7 904 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 TRIM45Q9H8W5 580 aaPredicted RBP17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 ADAP2Q9NPF8 381 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 ZNF358Q9NW07 568 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 MS4A12Q9NXJ0 267 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 XPR1Q9UBH6 696 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 PPT2Q9UMR5 302 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 COL12A1Q99715 3063 aa17.61■□□□□ 0.41
ATPAF2-201ENST00000444058 SPTAN1Q13813 2472 aaKnown RBP17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 WIPF3A6NGB9 483 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 GABRR3A8MPY1 467 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 RIPK2O43353 540 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 MYO1DO94832 1006 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 SIX3O95343 332 aaPredicted RBP17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 CLDN9O95484 217 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 PTX3P26022 381 aaPredicted RBP17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 CLCN2P51788 898 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 GPR143P51810 404 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 HNRNPFP52597 415 aaKnown RBP17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 OR1C1Q15619 314 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 ELAVL1Q15717 326 aaKnown RBP17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 ZNF766Q5HY98 468 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 OR4C11Q6IEV9 310 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 ADGRD1Q6QNK2 874 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 MYLK4Q86YV6 388 aaPredicted RBP17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 KIF2BQ8N4N8 673 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 FAM47BQ8NA70 645 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 TMEM52Q8NDY8 209 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 RGMAQ96B86 450 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 DEFB126Q9BYW3 111 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 TXLNGYQ9BZA5 131 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 MRPL46Q9H2W6 279 aaKnown RBP17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 CDCP1Q9H5V8 836 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 DMRT3Q9NQL9 472 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 VTI1BQ9UEU0 232 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 SLC5A6Q9Y289 635 aa17.6■□□□□ 0.41
ATPAF2-201ENST00000444058 TGFBR3LH3BV60 316 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 FOXE1O00358 373 aaPredicted RBP17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 MAN1A2O60476 641 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 SMIM24O75264 130 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 CD46P15529 392 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 TRHRP34981 398 aaPredicted RBP17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 TDGF1P3P51864 188 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 MLF1P58340 268 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 CUL3Q13618 768 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 SERTAD2Q14140 314 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 TMEM132CQ8N3T6 1108 aa17.59■□□□□ 0.41
ATPAF2-201ENST00000444058 ZCCHC7Q8N3Z6 543 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms